Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1173 |
Symbol | |
ID | 5611501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 1394109 |
End bp | 1394495 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640932022 |
Product | hypothetical protein |
Protein accession | YP_001472912 |
Protein GI | 157374312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCA AATCAGTTTA TGAAGCCCTA CCCTTTAGCT ATATTTCCAT TGGCAGTGCC TGCATCTTGA TGTTGGAACA GAAAGCAGCA ATCTTCTTTG CAATGGTCGT TTTTGCACTA GGTGCAAAAA TCTATAATAT GCGTTCACAA AACAGACGTA CGGATCCAGT GCGAAAACGA AAACCAGGTA AAATCCCCGC CTCACTCTAT AATTTTGTTC CCTTTATCTA TCTATTCACA GCGACAGTGG TATTTAAACT ATATCCAACT AAGTTTGGAG CAATGATAGG AACAGGCTTA ATGGTTTACT CCCTCTACAT TTTAATTCAA CGTTCCTCAA ACAGACGTCA TAGCCTTTCG AACTCACAAT GCTATCCGAA TATGTGA
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Protein sequence | MIAKSVYEAL PFSYISIGSA CILMLEQKAA IFFAMVVFAL GAKIYNMRSQ NRRTDPVRKR KPGKIPASLY NFVPFIYLFT ATVVFKLYPT KFGAMIGTGL MVYSLYILIQ RSSNRRHSLS NSQCYPNM
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