Gene Ssed_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1173 
Symbol 
ID5611501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1394109 
End bp1394495 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content40% 
IMG OID640932022 
Producthypothetical protein 
Protein accessionYP_001472912 
Protein GI157374312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA AATCAGTTTA TGAAGCCCTA CCCTTTAGCT ATATTTCCAT TGGCAGTGCC 
TGCATCTTGA TGTTGGAACA GAAAGCAGCA ATCTTCTTTG CAATGGTCGT TTTTGCACTA
GGTGCAAAAA TCTATAATAT GCGTTCACAA AACAGACGTA CGGATCCAGT GCGAAAACGA
AAACCAGGTA AAATCCCCGC CTCACTCTAT AATTTTGTTC CCTTTATCTA TCTATTCACA
GCGACAGTGG TATTTAAACT ATATCCAACT AAGTTTGGAG CAATGATAGG AACAGGCTTA
ATGGTTTACT CCCTCTACAT TTTAATTCAA CGTTCCTCAA ACAGACGTCA TAGCCTTTCG
AACTCACAAT GCTATCCGAA TATGTGA
 
Protein sequence
MIAKSVYEAL PFSYISIGSA CILMLEQKAA IFFAMVVFAL GAKIYNMRSQ NRRTDPVRKR 
KPGKIPASLY NFVPFIYLFT ATVVFKLYPT KFGAMIGTGL MVYSLYILIQ RSSNRRHSLS
NSQCYPNM