| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1171 |
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| Symbol | |
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| ID | 5612146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1393127 |
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| End bp | 1393588 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932020 |
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| Product | cytochrome c, class II |
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| Protein accession | YP_001472910 |
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| Protein GI | 157374310 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3909] Cytochrome c556 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA ATCTGAAAAT AGCCATTCTC GCCTGTATTA CAGGCTCTGT TTTAGCGACT
ACAGCACAAG CAAACAATTT CAAAGAAACC GATGATGCCA TTCACTATCG TCAATCAGCA
TTTAGCCTGA TGGCATATAA CTTTGGTGAC ATGGGTGCCA TGTTAAAAGG AAAGAAGCCA
TTCGATGCTC AAGTCTTCAG CCTGCGCGCA GAAAATGTAG CTGCATTATC TAAGCTTCCC
TTAGAAGGAT TCATTGCAGG TTCTGACAAA GGGGAAACTG GAGCTCTATC TAAGATCTGG
ACTGAAAAGT CTGACTTCGA TGCCAAGATG AAACAACTTC AGCAAGATTC AGCCGCGCTC
GCCATTGCCG CTAAGTCAGA CGACAGGAAA GCAATTAAAC AAGCCTTTAT GAAAACAGCT
AAGAACTGTA AAGGCTGTCA CGACGTGTAT AAAAAAGACT AA
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| Protein sequence | MKKNLKIAIL ACITGSVLAT TAQANNFKET DDAIHYRQSA FSLMAYNFGD MGAMLKGKKP
FDAQVFSLRA ENVAALSKLP LEGFIAGSDK GETGALSKIW TEKSDFDAKM KQLQQDSAAL
AIAAKSDDRK AIKQAFMKTA KNCKGCHDVY KKD
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