| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1169 |
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| Symbol | |
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| ID | 5612144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1391688 |
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| End bp | 1392050 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932018 |
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| Product | ribosomal subunit interface protein |
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| Protein accession | YP_001472908 |
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| Protein GI | 157374308 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA TTACAAGCAA ACACCTTGAA GTCACTGCCC TTATCCGCGA ACGCATAGAA
GCCCGTCTAG AGAAGCTTTC CAGACATGAT GTGCAGTTGA TTAATCCTCA TGTAATCATA
ACTCAAGAGA AACAACTCTT TAAAATTGAA GCTTCCGTCG GCATCCCGAA TAGCACGCTT
TTCGCTCAAG CAAAACATGA AGATCTTTAT AGCGCGATTA ACGCGATGGG GCAAAAGTTA
GAGAAGCAGT TGAATAAACT CACCCATAAG CCAGAAGCAC AGCGAAATTC CTCACACAAA
CGTCAAGAGG AAGCGCCTGA AAAGGATTCA GAGCTGGATT TAGAAGAGGA ATACGCAGCT
TAA
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| Protein sequence | MTKITSKHLE VTALIRERIE ARLEKLSRHD VQLINPHVII TQEKQLFKIE ASVGIPNSTL
FAQAKHEDLY SAINAMGQKL EKQLNKLTHK PEAQRNSSHK RQEEAPEKDS ELDLEEEYAA
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