| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1165 |
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| Symbol | |
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| ID | 5614052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1385259 |
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| End bp | 1386917 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932014 |
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| Product | hydroxylamine reductase |
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| Protein accession | YP_001472904 |
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| Protein GI | 157374304 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
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| TIGRFAM ID | [TIGR01703] hydroxylamine reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGTA TTCAGTGTGA ACAAACAATT AGAACCCCAG CAGGAAATGG TTGTAGCTAT
TCTCAAGGAA TGTGCGGAAA GCTTGCCGAA ACTTCCGATC TACAAGATCT ACTTATCTAT
GTACTTCAAG GTGTATCTGC CTATGCAGTA AAGGCTCGTG AGTTCGATAT TATCGATCAT
GAGATCGACA CCTTCGTTCC TAAGGCCTTC TTTGCTACCT TGACCAATGT TAACTTCGAC
GACGCCAGAC TCGTCGAGTA TGTTGAGCAA GCCAATGCTT ACCGTGGCCG CTTGCAAGAT
GCCTATGAGA CTGCATGTAC CGCTAAAGGC GTGACTCCTG AACAGATGAG TGCTCCAGCA
CAATTAATTT TAGCCACTTC AAAGCCGGAG ATGATCACTC AGGCTGCACA GGCTGCTCCG
AATCGTGGCG ACGTTCACGA AGATATTTTG GGCCTTCGCC TGTTATGTTT ATACGGTCTG
AAAGGTGCGG CTGCTTATAT GGAGCATGCG CGCGTTCTTA GCCAGACTAA TGATGAGGTT
GCAGGTCAAT TCCATGAGAT CATGGCTTTT CTTGGTGAAG ATTCAGTTGA TGTCGATAAG
CTTTTTGCTA CATCAATGGA GATTGGCCAG TTAAACTACA AAGTGATGGC AATGCTGGAT
GAAGGTGAAA CAGAATCCTT CGGCCACCCA GAGCCAACTC AAGTGAACAC AGTTGCAGTA
AAAGGTAAGG CTATCTTGGT TTCTGGCCAT GATATGGTCG ACCTTGAACT TATCCTTAAG
CAAACTGAAG GTAAAGGCAT CAACGTCTTT ACTCACGGTG AGATGCTACC TGCATTGGCT
TACCCTGAGT TTAAGAAGTA TCCACATCTG GTGGGTAACT ATGGTAGTGC TTGGCAGAAC
CAACAGAAAG AGTTTGCTAA CTTCCCTGGT GCGGTAGTGA TGACCTCTAA CTGTATTATC
GATCCGAACG TAGGTAGCTA CGCAGACCGT ATCTTCACTC GCAGTATCGT TGGCTGGCCT
GGTGTGACTC ACTTAGTGGG TGATGACTTT ACTCCGGTTA TCGAAAAAGC ATTAGCGCTT
GACGGCTTCA TTTATGATGA GATCCCCCAT CTTATCACCA TAGGTTTTGC CCGAAATGCA
TTGATGGCAG CAGCTCCTGC TGTGATTGAT AACGTGAAGA ATGGTTCTAT CAAGCACTTC
TTCCTCGTCG GTGGTTGTGA TGGTGATAAG GCTGAGCGTA GCTACTTCAC CGATATTGCG
ACTCAGGCGC CAGATGATTC AGTGATTCTG ACTCTGGGTT GTGGTAAGTA TAAGTTTAAT
AAACTTGAGT TTGGTGATAT CAACGGTATC CCGCGTCTTC TCGATATCGG CCAATGTAAT
GACTCCTACT CGGCTATTCA GCTTGCTATC GCTCTGTCTG AAGCATTTGA GTGTGAGATC
AATGAGCTGC CATTGAGCAT AGTGCTTTCA TGGTTTGAGC AAAAGGCGAT AGTTGTGTTG
CTGACACTCT TGTCATTAGG CGTTAAGAAT ATTCGTACCG GTCCAACTCC TCCGGCGTTC
TTAACCCCTA ACCTGCTTAA AATATTGGAA GATAAGTTTG GTCTTCGTAA TACAACGACC
GTTGAAGAAG ATCTTAAGAC AATTTTAAAC GTCGCTTAA
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| Protein sequence | MFCIQCEQTI RTPAGNGCSY SQGMCGKLAE TSDLQDLLIY VLQGVSAYAV KAREFDIIDH
EIDTFVPKAF FATLTNVNFD DARLVEYVEQ ANAYRGRLQD AYETACTAKG VTPEQMSAPA
QLILATSKPE MITQAAQAAP NRGDVHEDIL GLRLLCLYGL KGAAAYMEHA RVLSQTNDEV
AGQFHEIMAF LGEDSVDVDK LFATSMEIGQ LNYKVMAMLD EGETESFGHP EPTQVNTVAV
KGKAILVSGH DMVDLELILK QTEGKGINVF THGEMLPALA YPEFKKYPHL VGNYGSAWQN
QQKEFANFPG AVVMTSNCII DPNVGSYADR IFTRSIVGWP GVTHLVGDDF TPVIEKALAL
DGFIYDEIPH LITIGFARNA LMAAAPAVID NVKNGSIKHF FLVGGCDGDK AERSYFTDIA
TQAPDDSVIL TLGCGKYKFN KLEFGDINGI PRLLDIGQCN DSYSAIQLAI ALSEAFECEI
NELPLSIVLS WFEQKAIVVL LTLLSLGVKN IRTGPTPPAF LTPNLLKILE DKFGLRNTTT
VEEDLKTILN VA
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