| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1159 |
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| Symbol | rpsP |
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| ID | 5614038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1380135 |
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| End bp | 1380386 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932008 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001472898 |
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| Protein GI | 157374298 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000121606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTACCA TTCGTTTAGC TCGTGGCGGC GCAAAAAAGC GTCCATTTTA CAACATCGTA
GTTGCTGATA GCCGTAACGC TCGTGACGGT CGTTTCATCG AACGTGTTGG TTTCTTCAAC
CCAATGGCTC GTGGCCAGGA AGAAACTCTA CGTTTAGACC TAGCTCGCGT TGAGCACTGG
GTTGCTACTG GTGCTGCTAC ATCTGATCGT GTAGCAAAGC TAATCAAAGA CGCTCGTAAA
GCTGCTGCTT AA
|
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| Protein sequence | MVTIRLARGG AKKRPFYNIV VADSRNARDG RFIERVGFFN PMARGQEETL RLDLARVEHW
VATGAATSDR VAKLIKDARK AAA
|
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