| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1157 |
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| Symbol | |
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| ID | 5609879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1377246 |
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| End bp | 1378034 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932006 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_001472896 |
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| Protein GI | 157374296 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000603609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATAT TTTCCGCTTC AGCCATGTTA TTTTACTGCA TTGCCTTAGT GCTAGTGGTT
AGCCGCCTCT TTCATGCCGA CGGCCCTAAC CGACGCATTG TTGCCGCCTT TGCAGCGATC
GCCGTAGTAC TTCATGCCGC TGCACTCTCT CAGGCAACTT TTACCGGCGA CGGTCAAAAC
TTTAGCCTGA CCAATGTAAT ATCTATGGTG AACTGGATTA TCGCTTTCAC CTTCACGATA
CTGTTATTCA GACTAAAAAT GATAATAGTC GTGCCCGTGA TTTATGCCTG TTCAATTATC
TCCGTTGCGC TTCTATGGCT TGTTCCACCT GAATATATAA CACATTTCGA ACTTCATCCG
GATGTGCTGT CTCATGTGGT GTTATCACTC ATGGCCTACA GCGCCCTGAT GATAGCGGCG
CTATACGCGA TACAGCTTGC CATTATTCAA CATAAGTTAA AGAGTAAGAA ACTCATCATG
AGTCCCTCTA TGCCACCTCT GATGACCGTT GAGAAGCAGC TTTATCATTT GGTCATCGTC
GGCGTTATTC TATTAAGTCT CTCGCTAGCG ACTGGCTTTA TTTTCCTCGA TGATATGTTT
TCAGAAGGAA AAGGACACAA GGCGATACTC TCTATCATCG CCTGGTTTAC CTATATAGCC
ATGCTTGCAC AGCAATATTG GGTGGGCTGC AAAATAAGAA CCGCCGTGTT CTATACCCTG
TCCGGGGCTA CCCTGCTATC GCTCGCCTAT TTTGGAGCAC GAATAGTCAA AGAACTTATT
CTTACCTAA
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| Protein sequence | MVIFSASAML FYCIALVLVV SRLFHADGPN RRIVAAFAAI AVVLHAAALS QATFTGDGQN
FSLTNVISMV NWIIAFTFTI LLFRLKMIIV VPVIYACSII SVALLWLVPP EYITHFELHP
DVLSHVVLSL MAYSALMIAA LYAIQLAIIQ HKLKSKKLIM SPSMPPLMTV EKQLYHLVIV
GVILLSLSLA TGFIFLDDMF SEGKGHKAIL SIIAWFTYIA MLAQQYWVGC KIRTAVFYTL
SGATLLSLAY FGARIVKELI LT
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