| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1156 |
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| Symbol | |
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| ID | 5609878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1375764 |
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| End bp | 1377059 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932005 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472895 |
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| Protein GI | 157374295 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0523696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACGCGA TATCGACAAG CGCACTTCTG CTTATTCTTG TTATATTATT GATTATTTCA
GCCTACTTCT CAGGCTCAGA AACCGCCATG ATGTCCCTCA ATCGCTATCG TCTAAAGCAC
CTCGCGTCTA AGGGGCATAA GGGTGCAAAT CGTGCAATTA GGATGTTAGA GCGACCGGAT
AGGTTAATTG GGCTTATCTT AATAGGTAAC AACCTGGTCA ATATTCTAGC TTCCGCTATA
GCGACCATCA TTGGAATACG ATTGTTTGGT GATGTGGGGG TCGCCATTGC CACTGGAGTG
TTAACGTTAG TTGTCTTAGT ATTTGCCGAA GTCACCCCTA AAACAGTTGC CGCACTTCAT
CCTGAACGCA TCGCCTTCCC ATCAAGCTTA ATCCTTAAAT GGCTGCTGGT AATCCTCTCG
CCATTGGTAA AGGCCGTAAA CTTAATTACT TCAGACTTCC TTCATCTGCT CGGGATTCAT
TCAATAAAAG CCTCAGATGC TCTGAGCCAG GAGGAGCTGA GAACCGTCGT TCATGAAGCT
GGCGCATTGA TCCCCACACG TCACCAGGAG ATGCTGCTAT CTATTATGGA TCTTGAAAAA
GTGACAGTTG AAGACATTAT GGTGCCGCGT TCAGACCTAT ACGCCATCAA TATCAACGAC
GAGTTTAAGA GCATTAATAA GCAGGTTATT CAGAGCCCGC ATACTCGCGT CTTGTTATAC
AGAGACAATA TCGACGATGC CGTAGGCTTC GTTCACCTTC GTGATGCACT TAGATTACAA
TCCAAAGAGC AGTTCAGTAA GTCTTCACTA CTGCGCGCCG TAAAAGAGCT CTACTTCATC
CCTGAGGGCA CACCTCTCAA CGTGCAGCTG GGTAACTTCC AGCAGAATAA GGAACGTATA
GGGCTAGTGG TCGATGAATA TGGTGACATT CAGGGCTTAG TGACCCTCGA AGATATCCTC
GAGGAGATTG TCGGAGACTT TACGACCTCC ATGGTCACCA CGCCCAGCGA AGACATCAAT
CAGCAGCAAG ATGGCAGTTT CTTAATTGAA GCGAGCATTA ATATTCGAGA GATGAATAAA
GAGATGCAAT GGAGTTTTCC TATCGATGGT CCTAAAACAC TAAACGGCCT TATCGTGGAG
TATCTCGAAG AGATCCCAGC ACCAAATACT AGCATGCGTA TCGCAGGCTA TCCTCTGGAA
GTCATAGATG TCGCCGACAA TAGGGTCAAA ACTGTCAGGG TGATGCCGCA GTATTATAAA
GCCCCCAAGA AACATGAAAT ACTCAAGAAA CGCTAA
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| Protein sequence | MDAISTSALL LILVILLIIS AYFSGSETAM MSLNRYRLKH LASKGHKGAN RAIRMLERPD
RLIGLILIGN NLVNILASAI ATIIGIRLFG DVGVAIATGV LTLVVLVFAE VTPKTVAALH
PERIAFPSSL ILKWLLVILS PLVKAVNLIT SDFLHLLGIH SIKASDALSQ EELRTVVHEA
GALIPTRHQE MLLSIMDLEK VTVEDIMVPR SDLYAININD EFKSINKQVI QSPHTRVLLY
RDNIDDAVGF VHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL GNFQQNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MVTTPSEDIN QQQDGSFLIE ASINIREMNK
EMQWSFPIDG PKTLNGLIVE YLEEIPAPNT SMRIAGYPLE VIDVADNRVK TVRVMPQYYK
APKKHEILKK R
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