Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1151 |
Symbol | |
ID | 5610372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1371193 |
End bp | 1371930 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640932000 |
Product | pyridoxine 5'-phosphate synthase |
Protein accession | YP_001472890 |
Protein GI | 157374290 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTA TTTTACTGGG TGTTAATATT GATCACATCG CGACCTTACG TCAGGCCCGT GGAACGTCGT ATCCGGATCC TGTGCATGCC GCTGCGGTTG CTGAACATGC CGGAGCCGAG GGGATCACGG TTCATCTGCG TGAAGACAGA CGTCACATCA TAGACCGTGA TATCTACCTG TTGGCCAAAA CATTAAAAAC ACGCATGAAT TTTGAGATGG CTGTAACAGA TGATATGCTC GATATCGCCT GTGAAGTTAA ACCTACTTAC GTGTGTCTGG TACCCGAGAA ACGTGAAGAA CTCACCACCG AAGGCGGCTT AGATGTTGCC GGTCAGATGG GCAAGATTGA AGCCGCTATT CGTCGTCTAA GCGATGTCGG TGTTAAGGTA TCGCTATTTA TCGATGCCGA TAAAACTCAA ATTGATGCCG CTGTTGCTGT TGGTGCCCCG CTGATTGAAA TCCACACAGG CTGTTACGCC GATGCCGAAA ATGAAGCCGA AGAGGCTAAA GAGCTGTCAC GTATCACCGA AATGGCCAAA TACGCTCACT CTAAGGGGTT AATCGTCAAT GCCGGCCATG GACTTCACTA CCATAACGTT AAGCCGATAG CTGCGATCCC AGAGCTTTAT GAGCTTAACA TCGGCCATGC AATTATCGCC CGCGCCGCTA TCGATGGTCT GGCGACAGCC GTTAAAGATA TGAAGCAGCT GATGAACGAA GGTCGCAGAG GCGAATAA
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Protein sequence | MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAE GITVHLREDR RHIIDRDIYL LAKTLKTRMN FEMAVTDDML DIACEVKPTY VCLVPEKREE LTTEGGLDVA GQMGKIEAAI RRLSDVGVKV SLFIDADKTQ IDAAVAVGAP LIEIHTGCYA DAENEAEEAK ELSRITEMAK YAHSKGLIVN AGHGLHYHNV KPIAAIPELY ELNIGHAIIA RAAIDGLATA VKDMKQLMNE GRRGE
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