Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1149 |
Symbol | era |
ID | 5610298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1369266 |
End bp | 1370273 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640931998 |
Product | GTP-binding protein Era |
Protein accession | YP_001472888 |
Protein GI | 157374288 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.28675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.946741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA AAAACGCGCC AGCAAACAAT GAAGCGGGTA AGCAGAGCGA ACCTAGCTTA GATGAACTGT TGGCACAGAT GAACAATCCC TCATCGGATG CAAAATACGA TGTGACGTAT TGCGGCATGG TAGCGATTGT TGGTCGACCA AATGTGGGTA AATCTACGTT ACTCAACAAG TTACTTGGTC AGAAGATCAG TATCACCTCT AAGAAGCCGC AAACGACCCG TCATCGCATC ATGGGTATTC ATACCGATGG CGCACGTCAG GTGGTGTTTA TCGATACGCC AGGCTTGCAC ATGGAAGAGA AGCGAGCCAT CAACCGCCTG ATGAACCGTG CCGCGGCCAG TTCATTAGCC GAAGTTAGCC TGGTGATCTT TGTTGTCGAC GGCATGACCT GGACCGACGA CGATGAGATG GTGTTGCGTA AACTGCAAAG CCGTGATGAT GGCCGTAAGA CAGTATTGGC GATCAACAAG GTCGATAACA TCAAAGATAA GGAAGCACTT TTCCCTTACC TCGAAGAGTT GTCGAAGAAG TTTGAGTTTG ATGAAATACT GCCGATTTCA GCTACTCAGG GCACCAATGT TCAGCGTATC TTAGATATGT CAGTCGAATC AGTGCCTGAG TCTCCACATT TCTTCCCGGA AGACTATGTG ACCGATAGGT CACAGAAGTT CATGGCATCT GAAATTGTTC GCGAAAAGCT GATGCGCTTC TTAGGTGATG AGCTACCTTA CGATTGTACG GTTGAGATTG AGCAGTTCAA GATGATGGAA AATGGCGTCT ATCAGATCAA TGCCTTAGTT CTTGTCGAGC GTGAAACACA GAAACGTATG GTGATCGGCA ACAAGGGCGA TCGCATCAAG AAGATTAGCT CTGCCGCTCG TGTCGATATG GAAGTCTTGT TCGATAACAA GGTCTTCCTC GAGATGTGGG TTAAGGTTAA GTCCGGTTGG GCCGATGATG AGCGTGCACT TCGCAGCTTA GGCTATGGCG AGGAGTAA
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Protein sequence | MTKKNAPANN EAGKQSEPSL DELLAQMNNP SSDAKYDVTY CGMVAIVGRP NVGKSTLLNK LLGQKISITS KKPQTTRHRI MGIHTDGARQ VVFIDTPGLH MEEKRAINRL MNRAAASSLA EVSLVIFVVD GMTWTDDDEM VLRKLQSRDD GRKTVLAINK VDNIKDKEAL FPYLEELSKK FEFDEILPIS ATQGTNVQRI LDMSVESVPE SPHFFPEDYV TDRSQKFMAS EIVREKLMRF LGDELPYDCT VEIEQFKMME NGVYQINALV LVERETQKRM VIGNKGDRIK KISSAARVDM EVLFDNKVFL EMWVKVKSGW ADDERALRSL GYGEE
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