| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1139 |
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| Symbol | |
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| ID | 5613794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1360387 |
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| End bp | 1360638 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931988 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472878 |
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| Protein GI | 157374278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2938] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.384538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTGAAC CGATGAAGAT TGCCAGAGTA AGATGGGCGT GCCGTAGAGG TATGCTTGAA
CTTGATGTCC TGTTTCAACC TTTTGTTGAA TCCCAATATG AGCAGTTATC CACCAAGGAT
AAAAATATCT TTGTTCGTTT ATTAGAGGGT GAAGACCCGG AGTTATTCGC CTGGTTTATG
GGTCACGAGC AGTGCCCCGA CCCCGAGCTT GCCGAAATGG TAATTCGTGT CCGTGGCAGA
GCGGCTCCAT AG
|
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| Protein sequence | MSEPMKIARV RWACRRGMLE LDVLFQPFVE SQYEQLSTKD KNIFVRLLEG EDPELFAWFM
GHEQCPDPEL AEMVIRVRGR AAP
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