| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1134 |
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| Symbol | |
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| ID | 5613769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1355690 |
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| End bp | 1356493 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931983 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472873 |
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| Protein GI | 157374273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.010051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAATT TAATTTGGTT TTTTATTAGC TGCCTGGGTT TAGGGGCGTT TGTAGGCTTT
ATGGCAGGTC TGTTAGGCAT AGGTGGGGGG ATTATCGCCG TGCCTGTACT TCTTTACCTG
TTGCCGTCGG CTGGATTTGA ACTGGGAGTT TTACCCCATG TGGCCATTGC TACATCTCTT
TCCGCGATTA TTTTAACCTC TTGTTCTTCG GCTTTTGCGC ACCATCGACG TGGCAATATT
CCATGGCCCC TGTTTAAACC TATGTTGCCC GGGTTGATTA TAGGCGCTTC TTGCTCCGGG
TTTATCTCAC ACGCGATTAG CGCCGATACC TTGCAACAGA CTTTTGCCAT ATTCGTGATT
TTAATGGCGG TTCAGATGGT GTTTCCGCTA CGGGTCGCTG GCGAAGAAAA GCCGATGCCC
GCCGCTTCAA CACTGTTTAT CGCCTCTGCT GCCATTGCTT CATTTGCCGC CTTGATGGGG
ATCGGTGGCG GTATACTCTT GGTTCCATTT TTAAGCTGGT GTGGCCTTCA GATGCGTAAT
GCTATCGGTT TTTCGGCCGC ATCGGGTGTG TTTATCGCTC TGTTTGGTAG TGTTGGGTAT
GTGTTGGCTG GATGGAATGT GACAGATCTA CCACCTGGGA CATTAGGCTA CGTCTATCTG
CCGGCGCTTT TGGGGATCAT CATCACCTCT GTCACTATGG CGCCAGTTGG TGTCAGAGCT
GCGACTCATT GGCCTACGCC TATCTTGAAA AAGATATTTG CCGTACTGCT TATTTTCACG
GGGATCAAGT TAGCCTTAGC TTGA
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| Protein sequence | MDNLIWFFIS CLGLGAFVGF MAGLLGIGGG IIAVPVLLYL LPSAGFELGV LPHVAIATSL
SAIILTSCSS AFAHHRRGNI PWPLFKPMLP GLIIGASCSG FISHAISADT LQQTFAIFVI
LMAVQMVFPL RVAGEEKPMP AASTLFIASA AIASFAALMG IGGGILLVPF LSWCGLQMRN
AIGFSAASGV FIALFGSVGY VLAGWNVTDL PPGTLGYVYL PALLGIIITS VTMAPVGVRA
ATHWPTPILK KIFAVLLIFT GIKLALA
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