| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1122 |
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| Symbol | |
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| ID | 5611610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1337070 |
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| End bp | 1338044 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931971 |
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| Product | inosine/uridine-preferring nucleoside hydrolase |
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| Protein accession | YP_001472861 |
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| Protein GI | 157374261 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA AAATCATATT AGACACAGAT CCGGGTATTG ATGATGTAAT GGCGATCCTG
TTCGCAGAGG CACACCCTGA GATCGAGCTA AAGGCGATCA CCACTATTTA CGGTAATGTG
ACCATAGAGG GCGCCACCCA TAATGCACTT TATCTGAAAC AGAAATATCA GCTACAGGCC
GATGTCGCTC AGGGAGCGAG TAAACCTATC GTCAGGCCGC CGGTTGGCCC AACCGTTGTG
GTGCATGGAG AGAGTGGTTT CGGTGATGTT GAGGTCCCCG CCGAGGTCGA AGGTGAGGCA
GATGCCAGGC CTGCGTATCA ATATATTATC GATGCCGTCA AAGCCGAGCC CAAAGAGATA
ACTCTGGTGG CTATCGGTCC TTTGACTAAC CTGGCGTTAG CTCTGCAGGC CGAGCCGGAA
ATTGTCAATC TGGTCAAGGA AGTGGTCATT ATGGGCGGTG CATTCGGGGT GAACGATCAC
CGCGGTAATG TGACTCCCTA TGCCGAGGCC AATATTCATG ATGATCCCCA TGCGGCCGAC
ATCGTTTTCA GTGCTTCCTG GCCTGTGGTT ATCATTGGAT TGGATGTCAC CGAGCAGAGC
TTCTTTACCG GAGATTATCT GGATAAGCTT CGAGTTGATG CCGGTGAAGT CGGCCAATTT
ATCTGGGATG TCAGCCGTTT CTATCTTAAA TTTTATAAGG AGAAGGTTGG TCTGGATGCC
TGCCATGTGC ACGACCCATC GGCCATTGCT TATGTGATAG AGCCTGAACT GTTTACTCTC
AGGGAAGGGC CTGTACGCGT GGTGACCGAT GGGCCTGCAG AAGGGATGAC AATTCAGAAG
TTTGATGGTC GTACGTATCT TCATGACGAA TGGGAGAAGC ATACGCCACA GCGTGTGGGA
GTTGCCGTGA AGGATGCCGA GCTGCTTGAG ATATATCGTC AGAGCATCAT AGATTATGGC
CGCAAAATGA GTTAA
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| Protein sequence | MTKKIILDTD PGIDDVMAIL FAEAHPEIEL KAITTIYGNV TIEGATHNAL YLKQKYQLQA
DVAQGASKPI VRPPVGPTVV VHGESGFGDV EVPAEVEGEA DARPAYQYII DAVKAEPKEI
TLVAIGPLTN LALALQAEPE IVNLVKEVVI MGGAFGVNDH RGNVTPYAEA NIHDDPHAAD
IVFSASWPVV IIGLDVTEQS FFTGDYLDKL RVDAGEVGQF IWDVSRFYLK FYKEKVGLDA
CHVHDPSAIA YVIEPELFTL REGPVRVVTD GPAEGMTIQK FDGRTYLHDE WEKHTPQRVG
VAVKDAELLE IYRQSIIDYG RKMS
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