| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1120 |
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| Symbol | |
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| ID | 5611608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1334393 |
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| End bp | 1335856 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931969 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_001472859 |
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| Protein GI | 157374259 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTAG TTGTTTATCA AAATTATGTC CATGGACAGT CTCTCTCCAA CGACACAGGT
GAAACCTTTG AAGTCATTAA CCCCGCTACC GGAAAAGTCA GCTATTTAGT CGAGAGCGCC
GATGCGAGCA TTCAGAAAGC GGCCATAGCA AGTGCCAAGA GAGGTTTTGC CGTCTGGTCA
AAAATGACCG CGATGGAACG CAGTCGCATC CTATTAAAAG CCGTCGCACT CCTCCGTGAG
CAAAATGACG AGCTCGCCGC TATCGAGGTG CAAGATACAG GCAAACCTTG GCAGGAAGCC
TCCGTGGTCG ATGTCGTTAC CGGCGCAGAC TCCATTGAGT TTTTCGCAGG CCTTGCCCCG
AGTATCGAAG GCAACCAGCA ACAAGTTGGC GATGATTTCT ATTACACCCG CCGCGAGCCG
CTGGGTATTT GCGCTGGCAT CGGTGCATGG AACTACCCGC TACAGATCGC CTGTTGGAAA
TCTGCACCTG CATTAGCCTG CGGTAACGTG ATGATCTTTA AACCATCGGA AGAGACGCCA
CTCGGCGCCA TAAAACTGGC CGAAATATTG ACTCAAGCAG GTGTGCCCGA TGGCGTCTTT
AATGTCGTCC AGGGAGATGG CCGTGTTGGC GCCTGGCTGA CCACCCATGA TGATATCGCT
AAAGTCTCAT TCACCGGTGA AGTGGGTACG GGCAAGAAAG TGATGGCCGC CGCTGCGGGC
TCACTGAAAG AGGTCACCAT GGAGCTCGGC GGTAAGTCAC CGCTGATCAT CTTCAACGAT
GCCGATATCG ACAATGCGGT TTCTGCGGCC ATGCTGGCTA ACTTCTACAC CCAGGGCGAA
GTCTGCACCA ACGGTACCCG CGTATTCGTA CAACAAGATA TCTATCCGCA GTTTATTGAA
AAACTGCTGC AGCGCACCCG AGACAACATA GTCTGCGGCG ATCCTATGGC TCCGGAGACT
AACTTCGGTG CTCTAATCTC AAAGGCACAC CGAGACAAAG TCCTGAGTTA CATCGAGATA
GGTAAAAAAG AGGGCGCGGA GCTGCTCGCT GGCGGTCATG CACTTTCGCC TGATAATGCC
CCCAATGGCT TCTTCGTCGC ACCGACCATC TTTGGTAACT GCACCGATAA GATGACATTG
AGCCAAGAGG AGATCTTTGG CCCTGTGATG TCACTATTGA CCTTCACCGA CGAAGAGGAA
GTGATCCGCC GCGCCAACGA TACTCGTTTA GGCTTAGCCG CAGGCGTATT TACCCAAGAC
ATTACTCGCG CCCATCGCGT AATTCATCAA ATGCAAGCAG GGATATGCTG GATCAATGCC
TATGGTGCCT CCCCTGCAGA GATGCCGGTT GGTGGCTACA AGATGTCAGG CATTGGCCGT
GAGAATGGTA GTGAGACCCT AAAAGCATAC ACCCAAATCA AAGCCGTATA CGTTGGTATG
CAGCCTCTTG AAAGTCCGTT TTAA
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| Protein sequence | MSLVVYQNYV HGQSLSNDTG ETFEVINPAT GKVSYLVESA DASIQKAAIA SAKRGFAVWS
KMTAMERSRI LLKAVALLRE QNDELAAIEV QDTGKPWQEA SVVDVVTGAD SIEFFAGLAP
SIEGNQQQVG DDFYYTRREP LGICAGIGAW NYPLQIACWK SAPALACGNV MIFKPSEETP
LGAIKLAEIL TQAGVPDGVF NVVQGDGRVG AWLTTHDDIA KVSFTGEVGT GKKVMAAAAG
SLKEVTMELG GKSPLIIFND ADIDNAVSAA MLANFYTQGE VCTNGTRVFV QQDIYPQFIE
KLLQRTRDNI VCGDPMAPET NFGALISKAH RDKVLSYIEI GKKEGAELLA GGHALSPDNA
PNGFFVAPTI FGNCTDKMTL SQEEIFGPVM SLLTFTDEEE VIRRANDTRL GLAAGVFTQD
ITRAHRVIHQ MQAGICWINA YGASPAEMPV GGYKMSGIGR ENGSETLKAY TQIKAVYVGM
QPLESPF
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