| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1115 |
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| Symbol | |
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| ID | 5611595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1328071 |
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| End bp | 1328763 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931964 |
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| Product | adenosylhomocysteine nucleosidase |
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| Protein accession | YP_001472854 |
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| Protein GI | 157374254 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCG GTATTATTGG CGCTATGGAG CCAGAAGTTG CGCATTTAGT TGAGTCAATG
GAAAACCCAA GCTCTACAAC AATTGCGGGT ATCGAGTTTG TTGCGGGCCA GCTTGCAGGC
AAAGACGTGG TTGTCACTCG TTCCGGTATC GGCAAAGTCA CTGCCAGTAT CGCAACCACA
TTGCTTATCG AAAAGTACGC GCCTGACGCA ATTATTAACA CTGGCTCGGC AGGCGGTTTT
GCCGATGAGC TTGCTATCGG TGATATCGTT ATCTCATCTG AAGTGCGTCA CCACGATGTA
GACGTCACAG CATTTGGTTA TGAGATTGGC CAGATGGCGC AACAACCCGC CGCCTTTATC
CCGGATACTG CACTCGTCAC AGCTGCGCAA AAAGCCGTCG CGAGCCTGGG CGAAGTTAAA
GCCATCGAAG GGTTGATCTG TACCGGTGAC AGCTTTATCT GTGACCCTGT CCGTACTAAG
ACCATGTTAG AGCACTTCCC AACCATGGCT GCATGCGAAA TGGAAGGCGC GGCGATAGCT
CAAGTATGTC ATCAGTTCGA TGTGCCCTTT GTCGTTATTC GCTCACTCTC TGATAATGCT
AACAATGACT CACCTGTCGA TTTCGACGAG TACCTAGTTA AGGCGGGCCA TCACTCTGCG
TTAATGGTGA TTGCACTGCT AGAGCAGTTA TAA
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| Protein sequence | MKIGIIGAME PEVAHLVESM ENPSSTTIAG IEFVAGQLAG KDVVVTRSGI GKVTASIATT
LLIEKYAPDA IINTGSAGGF ADELAIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFI
PDTALVTAAQ KAVASLGEVK AIEGLICTGD SFICDPVRTK TMLEHFPTMA ACEMEGAAIA
QVCHQFDVPF VVIRSLSDNA NNDSPVDFDE YLVKAGHHSA LMVIALLEQL
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