| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1108 |
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| Symbol | |
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| ID | 5611907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1320278 |
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| End bp | 1321024 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931957 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472847 |
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| Protein GI | 157374247 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2863] Cytochrome c553 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTCA ATATCACAAC GACAAATAAA ACAGCCCCAA ATGGCTCCGG TTATCGCCGG
GGATTAAACG CCTCTCTCGG TCGATATATG GCAATAGCAC TACTGCTATT CATCGCTCCC
TTTCGGGTCA TGGCCGGCAC ACCGATACAG CTAGCCTCAG CAGCTTCCCC AGAGGGGGGA
GTAAAACTAT TTAATCAATG TGTGGCATGC CATGGCGCTC GGGGAGAGGG TAATGCGCTC
CTGAAAGCAC CGGCAATCGC CGGACAAGCA GCATGGTATA CAGACAGACA GCTCAACAAC
TTCATTAATG GACTCAGGGG AGCTCATGAG GAAGATATCA ATGGCAAACA GATGCTAGCC
ATAGTCAAAG GACTAAGTAG GGATGATATT CCAGCTTTAA CTGCCTATAT AGAGTCCCTG
CCTCGACCAG ATGCTCAAGA CAATGAAACT ATCGGCCAAA CGACAGGCTC TCTTAAGAAT
GGCAGCCGTT ATTATCAAGG CAAGTGCGGC GCCTGCCACG GTGGACAGGC CGAAGGTAAC
CCGCAATTTA ACGCTCCCAG ACTGACCCAT CTCTCCGCCA GCTACCTACA CAGACAATTA
GCTAATTTTA CTCAGGGGAT CCGTGGGAAT CATAGCGAAG ACAAGCTAGG AATGCAGATG
GCTATGATGG CCAAAACCAC ATCCGGCGAT GAGCTCAACG ATATCGTCTA TTTCATTACA
ACCCTGTCGA ATAATGAGCA GAAGTAG
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| Protein sequence | MFFNITTTNK TAPNGSGYRR GLNASLGRYM AIALLLFIAP FRVMAGTPIQ LASAASPEGG
VKLFNQCVAC HGARGEGNAL LKAPAIAGQA AWYTDRQLNN FINGLRGAHE EDINGKQMLA
IVKGLSRDDI PALTAYIESL PRPDAQDNET IGQTTGSLKN GSRYYQGKCG ACHGGQAEGN
PQFNAPRLTH LSASYLHRQL ANFTQGIRGN HSEDKLGMQM AMMAKTTSGD ELNDIVYFIT
TLSNNEQK
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