| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1096 |
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| Symbol | |
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| ID | 5612255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1300071 |
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| End bp | 1300589 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931945 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472835 |
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| Protein GI | 157374235 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0307169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00778647 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAGAACC AAGCCGCTAA GTCTACTCAT TCTGCCAATT CCACAACCGA AGAGGCAGCT
AAAGCAAGAG AGCTCAATGC TGCAGCCCCG GAGAGTAAGG TAACCGCTAA GCCGGTGAAG
CCTAAGCTAC CCAAACGGCT TGCTGCCTTG TGTGCCTTGC TCACCATTGC CTCGGTCAGC
GGCATCATAG CCAAACAGGG GGTACTCTTT TGTATTATCA CCTTGATGAT GGTCGTGGCT
ATTCTTGGAC GTCAAAGAAC GGCGATGTAT ATGCTGCGGG GCTATACCCT AATCCAACTT
GCCTTAGTGA GTATGCTGCC AGTGATCTTG TACGATCCCG GTAACTTAGT TGTGGGTAAC
CCTTCGAGCT TTCAGCTCGG TGAGCTGCAA GGGAAGATCC CCGACTACAT CATCTTCGCG
CTATTAATTC TGTTCTCTAT GTTACAGGTA TGGATAGCCT TCACTCCGAA GGTCAAAGCC
TACTTTAACA CTAAGATAAA TATGAATATT ATGAGCTAA
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| Protein sequence | MENQAAKSTH SANSTTEEAA KARELNAAAP ESKVTAKPVK PKLPKRLAAL CALLTIASVS
GIIAKQGVLF CIITLMMVVA ILGRQRTAMY MLRGYTLIQL ALVSMLPVIL YDPGNLVVGN
PSSFQLGELQ GKIPDYIIFA LLILFSMLQV WIAFTPKVKA YFNTKINMNI MS
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