| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1084 |
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| Symbol | |
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| ID | 5612602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1284578 |
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| End bp | 1285819 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931933 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001472823 |
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| Protein GI | 157374223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000542192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0207195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTCT ACCTCGTCGG CGGCGCCGTT CGCGATAACC TGCTTAACCT TACTGTCAAA
GATCGCGATC ATATGGTCGT CGGTGCAACC CCGCAGCAGA TGCTCGAGAT GGGATATCGC
CAGGTCGGTA AAGACTTCCC CGTATTCCTG CACCCTGAGA CAGGGCAAGA GTATGCTCTG
GCCCGCACGG AGCGAAAAAC CGGTGTAGGT TATGGAGGCT TTAGCTGCCA TGCCAGCCCG
GATGTCACTC TGGAGGAGGA CCTTCTCAGG CGCGATCTCA CCATTAACGC CATCGCTCAA
GATGAGGAGG GGCAGTTATA TGATCCCTAT GGCGGCGTCG ATGATATTAA CAACAGAGTA
TTGAGGCATG TCTCCGATGC ATTCGTCGAA GATCCCTTAA GAGTGCTCAG AGTGGCGCGC
TTTGCCGCAC GTTTTCACCG GCAAGGGTTC ACCATTGCAG ACGAAACTCT TGCGATGATG
ACTCAAATCA GCCACAGCGG TGAACTCGAG GCTCTGACTG CCGAACGGGT TTTTCTGGAA
TTAGATAAGG CCTTGGCAAC CGACAGTCCC CAGGTGTTTA TCCATGTTCT CAATCAGTGC
GATGCGCTGG CCATACTCTT TCCGGAGATC CACGCTCTGT TCGGTGTCCC TCAACCGGTA
AAATGGCACC CAGAGATAGA CACCGGCATA CATACTCTTA TGGTGTTAGA GCAGGCCGCT
AAACTTTGTG ATGATAATTC GGTGCGATTT GCCGCTCTGG TTCACGATCT GGGTAAAGCC
TTAAGCCCGA AGGAGCACCT GCCTAAGCAT CACGGTCATG GCCAAAAGGG GTTAGCCCTT
ATCAAGGTGC TGTGTGCCCG GGTCAGGGTA CCAAATGACT ATAGAGATCT GGCCCTGCTC
GTCAGCGATC TCCATCAGAA CATTCACCAG ATAGAAGAGC TAAGACCCGA CACCTTAGTT
AAGATATTCG ATAAGGCCGA CTTGTGGCGC AAACCCGAAC GACTCGAACA GATAGCGCTC
GCCTGTGAAG CCGATGCCAA GGGGCGACTG GGGCAGGAAG AGTGGAGCTA CCCCCAAGCC
GATTACTTCA AGCAATGTTT TATGGCTGCG AACAAGGTTG CGGTAAAACC CATCATAGAA
GCAGGCTTTA AAGGGGCAGA GATTAAAGCT CAGTTGCAAT TAAAACGTAT TGAAGCTGTC
GCAGAAATAA AACAAAACCT TAATCAAACA GACTCACCCT GA
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| Protein sequence | MKFYLVGGAV RDNLLNLTVK DRDHMVVGAT PQQMLEMGYR QVGKDFPVFL HPETGQEYAL
ARTERKTGVG YGGFSCHASP DVTLEEDLLR RDLTINAIAQ DEEGQLYDPY GGVDDINNRV
LRHVSDAFVE DPLRVLRVAR FAARFHRQGF TIADETLAMM TQISHSGELE ALTAERVFLE
LDKALATDSP QVFIHVLNQC DALAILFPEI HALFGVPQPV KWHPEIDTGI HTLMVLEQAA
KLCDDNSVRF AALVHDLGKA LSPKEHLPKH HGHGQKGLAL IKVLCARVRV PNDYRDLALL
VSDLHQNIHQ IEELRPDTLV KIFDKADLWR KPERLEQIAL ACEADAKGRL GQEEWSYPQA
DYFKQCFMAA NKVAVKPIIE AGFKGAEIKA QLQLKRIEAV AEIKQNLNQT DSP
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