| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1083 |
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| Symbol | |
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| ID | 5612601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1284101 |
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| End bp | 1284367 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931932 |
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| Product | major outer membrane lipoprotein, putative |
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| Protein accession | YP_001472822 |
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| Protein GI | 157374222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000293694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0136333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAA AAGTACTCAT GATTGCTGGT GTAGCAATGA CTGCCCTTCT AGGTGGCTGT
GCAAACACTA CTGCTCTTGA AGAAAGCGTA GCTAACCTTG GCAACAAAGT TGACCAACTA
TCATCTGAAG TTAGCTCTCT GAAGTCAGAG CAAGGTGCTC TTTCTGCAGA CGTTAAAGAT
GCAAAAGCAG CTGCTATGGA CGCACAAGCA GAAGCTAAGC GCGCAAATGA TCGTCTTGAC
AACGTTGCCT CTTCTTACAA GAAGTAA
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| Protein sequence | MNKKVLMIAG VAMTALLGGC ANTTALEESV ANLGNKVDQL SSEVSSLKSE QGALSADVKD
AKAAAMDAQA EAKRANDRLD NVASSYKK
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