| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1078 |
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| Symbol | |
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| ID | 5612999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1280011 |
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| End bp | 1280364 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931927 |
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| Product | dihydroneopterin aldolase |
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| Protein accession | YP_001472817 |
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| Protein GI | 157374217 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1539] Dihydroneopterin aldolase |
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| TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.130702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0492639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGGG TTTTAATACG ACAGTTAAAG ATAGAAACTG TTATCGGAGT TTATGAGTGG
GAAAAAAAGA TCCATCAAAG CTTACTTATC GATCTCGATA TGGCTTGGGA TAATAAACCC
GCTGCGGCGA GTGATGATTA CCAGCATGCA CTCTGCTATG AAACGGTTTC GAACCGACTC
ACAGCTTTAA TCACCGAAAA GCCGATTGAG TTGATTGAAA CTGTAGCCGA AATGACCGCT
AACTGTTTGA TGACCGAGTT TAGTGTACCT TGGGTAAAAG TGACGGTAAT GAAGCCTGGG
GCTGTACCTA GCGCCGCTGC GGTGGGTGTC GAAATTGAGC GGGGTCAATA TTAA
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| Protein sequence | MDRVLIRQLK IETVIGVYEW EKKIHQSLLI DLDMAWDNKP AAASDDYQHA LCYETVSNRL
TALITEKPIE LIETVAEMTA NCLMTEFSVP WVKVTVMKPG AVPSAAAVGV EIERGQY
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