| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1069 |
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| Symbol | |
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| ID | 5613042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1269405 |
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| End bp | 1270457 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931917 |
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| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
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| Protein accession | YP_001472808 |
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| Protein GI | 157374208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC GAAAGCCCCA GTTCAGACAT CCACGTCTGG AGGTGAACGA TCTAGGTTTA
ACTCACAGGG ATTATGAGGG AGCCCTCTCG ACCTTGTGTG CTGGTTGCGG ACACGATGCC
ATCACCGCCG CGGTGACGCA GGCCTGCGCC GAGTTATCAC TCCCGCCTCA TCGGATTGCA
AAAATATCCG GCATTGGCTG CTCCTCCAAG GCGCCTAACT ACTTCCTCAA TCACGCACAT
GGGTTTAATA CCGTACATGG CCGTATGCCG TCGGTGGCAA CAGGTGCGAA TATGGCGAAC
CGAGATCTGA TCTATCTGGG GATGTCGGGC GACGGAGACA GTGCGTCTAT CGGCTTTGGT
CAGTTCGCCC ATGTGGTTCG CAGACGACTC AATATGCTCT ACATGGTTGC CAATAATGGT
GTCTATGGTT TGACTAAGGG GCAACTTGCC GCGACGGCGG AGCAGGGGAT GAAAAATAAG
GCTGGAGAGG CCAGTCTGTT TACCGATATC GACCTGTGCG TCAGTGCGCT GCAGTTTGGC
GCCACCTTTG TTGCTCGCAG TTTTTCCGGT GATAAGGCTC AACTCGTGCC CCTTATTAAG
GCGGCGATAA GCCATAAGGG CTTCGCCTTT ATCGATATCA TCTCCCCCTG CGTCACCTTC
AATAACAACC CTGATTCGAC TCGCTCCTAT GACTATGTCC ATGACCATAT AGTCACGGCG
GCGGTCGCCG ATTTTGTGCC GGTGAAACAG GAGATCCGCT GTGAGAATGG TGATGCCGAT
AGCGAAGATA TCTGTTTACA TGACGGTTCT ATATTACGCC TGTCCCGGAT CCAGCCTGAT
TATGACGCCC ATGATCGTCT GCACGCTATG GCCAGAATTG AACAGGTGAA GGCCGAAGGT
AAGATATTAA CGGGGTTAAT GTATATAGAT CCGGAAGCCG ATGATTATCA TGAAATTAAC
CAGACTACCG ATACCCCTCT CAACGCCCTG AAGCAGGAGA CACTCTGCCC GGGGAATCAT
GTATTACAGA CCATAAATGA GAGCTTCAGA TAA
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| Protein sequence | MSYRKPQFRH PRLEVNDLGL THRDYEGALS TLCAGCGHDA ITAAVTQACA ELSLPPHRIA
KISGIGCSSK APNYFLNHAH GFNTVHGRMP SVATGANMAN RDLIYLGMSG DGDSASIGFG
QFAHVVRRRL NMLYMVANNG VYGLTKGQLA ATAEQGMKNK AGEASLFTDI DLCVSALQFG
ATFVARSFSG DKAQLVPLIK AAISHKGFAF IDIISPCVTF NNNPDSTRSY DYVHDHIVTA
AVADFVPVKQ EIRCENGDAD SEDICLHDGS ILRLSRIQPD YDAHDRLHAM ARIEQVKAEG
KILTGLMYID PEADDYHEIN QTTDTPLNAL KQETLCPGNH VLQTINESFR
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