| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1060 |
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| Symbol | |
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| ID | 5610132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1255995 |
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| End bp | 1257344 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931908 |
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| Product | glutamate--putrescine ligase |
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| Protein accession | YP_001472799 |
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| Protein GI | 157374199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0974728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT TAACTGCTTA TTTAAACGAA CACAAGATTA CCGAAGTTGA GTGTGTGATC
AGCGATATGA CCGGTATTGC CAGAGGTAAG ATCGCCCCTG TCGCCAAGTT TATCGATGAA
AAAGGGATGC GCATGCCTGA AAGCGTCCTG TTGCAGACGG TGACCGGCGA TTACGTCGAA
GATGAACCCT ATGATGCACT CTTGGATAGT GCCGATATCG ATTTTGTCTG TGTTCCCGAT
GAGAATGCTG TCTTTCAGCT GCCTTGGACT ATCGAGGCTA CCGCTCAAGT CATCCATGAT
ACTTACGACA AGATGGGTAA CCCTATCGAA TTGTCACCTC GAAATCTGCT GAAGAAAGTC
TTGAAACTCT ATGAAGATAA AGGCTGGAAG CCAGTCGTTG CGCCTGAGAT GGAGTTTTAT
CTCACTCGTC GTAACGAAGA TCCGGATCAG CCACTTATCC CACCGGTTGG ACGCTCCGGA
CGTCAAGAGT CGGGCAGACA ATCATTCTCG ATAGATGCGG CAAATGAGTA CGATCCTCTG
TTTGAAGATA TGTACGATTG GTGTGAAGTG CAGGGATTGG ATATCGATAC GTTAATCCAT
GAAGAGGGCA CTGCCCAGAT GGAGATTAAC TTCAGCCACG GCGATGCACT CTCTATGGCG
GATCAGGTCT TCGTTTTCAA GCGTACGCTC AAAGAAGCCG CACTTAAGCA TGGTGTCTGT
GCCACCTTTA TGGCTAAGCC TGTCGCAGAT GAGCCGGGCA GCGCGATGCA CCTGCATCAG
AGTATTGTCG ATGTGAAGTC AGGGCAGAAC ATCTTCTCGA TGAAAGACGG CACTAAGAGT
CCGCTCTTCT TCAGTTATAT CGGTGGATTA CAGAAATTCA TCCCGGAACT CTTGCCTCTG
TTAGCCCCGA ATGTGAACTC ATTCAGACGT TTCCTACCCG GCACATCGGC ACCGATTAAC
CTGGAGTGGG GGGAAGAGAA CCGTACCTGT GGCCTGCGTA TTCCTGAGTC TTCACCGCAG
AACCTTCGCG TCGAAAACCG TATTGCCGGC GCCGATTCGA ACAGTTATCT GTCGATCGCA
TCGAGCCTGT TATGTGGCTA TATCGGTATG GTCGAAGATG TAAAACCCTC GACGCCGGTT
CAGGGAAGAG CCAACGAGTC ACGTCAGAGT ATAAGTCTTC CTCTGACATT AGAGGAAGCG
TTAGGTGTTA TGTCTGAAAG CGTTGCCTGT CGGGAATATC TGGGTGAAGC ATTTACCATG
GGTTATATCG CGGTGAAGCA GGCAGATCTT GCCAGCTATA AACGCGTGAT CAGTTCATGG
GAGCGAGAGT ACCTGTTACT CACCGTCTGA
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| Protein sequence | MKKLTAYLNE HKITEVECVI SDMTGIARGK IAPVAKFIDE KGMRMPESVL LQTVTGDYVE
DEPYDALLDS ADIDFVCVPD ENAVFQLPWT IEATAQVIHD TYDKMGNPIE LSPRNLLKKV
LKLYEDKGWK PVVAPEMEFY LTRRNEDPDQ PLIPPVGRSG RQESGRQSFS IDAANEYDPL
FEDMYDWCEV QGLDIDTLIH EEGTAQMEIN FSHGDALSMA DQVFVFKRTL KEAALKHGVC
ATFMAKPVAD EPGSAMHLHQ SIVDVKSGQN IFSMKDGTKS PLFFSYIGGL QKFIPELLPL
LAPNVNSFRR FLPGTSAPIN LEWGEENRTC GLRIPESSPQ NLRVENRIAG ADSNSYLSIA
SSLLCGYIGM VEDVKPSTPV QGRANESRQS ISLPLTLEEA LGVMSESVAC REYLGEAFTM
GYIAVKQADL ASYKRVISSW EREYLLLTV
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