| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1059 |
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| Symbol | |
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| ID | 5610131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1255231 |
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| End bp | 1255992 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931907 |
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| Product | peptidase C26 |
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| Protein accession | YP_001472798 |
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| Protein GI | 157374198 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2071] Predicted glutamine amidotransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.22875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATG CAGGGCTTGC TGTCATTGGG GTGACGGCGT GCAACCAGGA GTTAGGCTTA
CATCCTTTTA ATATAGTGGG CGAGAAGTAC CTTCTTGCTA TTGCTGATGC GACCAAGGGT
TGGCCTTTGG TTATTCCCGC GCTGGGTCAC TGCCCGAGTG AGCTTATTTT GCCTCGCTTG
GACGGTATTT TGTTTACCGG TTCTCCCTCA AATATCGAGC CACATCACTT TCAAGGTGAA
GCAAGCGAAG CTGACACTCA TCATGATCCC AAGCGAGACG CGACGACTCT TCCTCTGTTA
AAAGCGGCGA TAGAGGCAGG TATCCCTGTC TTGGCAATCT GCCGTGGGTT TCAAGAGATG
AACGTCGTGT ATGGCGGAAG CCTACATCAA AAATTGCATC AAGTGGGCGG CTTTATCGAA
CACCGCGAAG ATAAAAGTAC GGCTGTCGAG GTGCAATATG GGATCTCCCA TGAGGTACAG
ATAGAACCTG GAGGACTGCT TCACGACGCA TGGGGCCGTA GCTCTGCAGA GGTTAACTCT
GTGCATACTC AAGGCGTAGA TCGCCTCGGA GTTGGGTTAC GGCCAGAAGC ATATGCACCA
GATGGTTTAG TAGAGGCTTT CTCTATTAAA GAAGCAAAGA ATTTTGCGCT GGGCGTGCAG
TGGCATCCTG AATGGAAGGT ACTGAATAAC GCTTTCTATA CCTCTATTTT TAATGCTTTC
AGTGATGCCT GTGAGCGCCG AGCAAAGAGA CGAGTGAGAT AA
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| Protein sequence | MSDAGLAVIG VTACNQELGL HPFNIVGEKY LLAIADATKG WPLVIPALGH CPSELILPRL
DGILFTGSPS NIEPHHFQGE ASEADTHHDP KRDATTLPLL KAAIEAGIPV LAICRGFQEM
NVVYGGSLHQ KLHQVGGFIE HREDKSTAVE VQYGISHEVQ IEPGGLLHDA WGRSSAEVNS
VHTQGVDRLG VGLRPEAYAP DGLVEAFSIK EAKNFALGVQ WHPEWKVLNN AFYTSIFNAF
SDACERRAKR RVR
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