| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1053 |
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| Symbol | |
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| ID | 5613561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1249406 |
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| End bp | 1249828 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931901 |
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| Product | glutathione-dependent formaldehyde-activating, GFA |
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| Protein accession | YP_001472792 |
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| Protein GI | 157374192 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGA GAAAAGGACA ATGCCTTTGT GGTGCGGTCA AGTTTGTTGC GAAAAATTCC
GAAAACAGTG TAGCAGCTTG TCACTGTGGC ATGTGCAGGA CATGGGGTGG TGGTCCGCTG
ATGGCTGTTA GCTGTGGGTC GGATGTGTCA TTTGAGGGAA AGGAAAATAT ATCTGTCTAT
AGTTCTTCTG ATTGGGCTGA GCGTGGTTTC TGTAAGAATT GCGGTAGCCA CCTATTTTAT
AGGCTTAAAC AAATTAGTGA GTACCAATTA TCCGCTGGTC TTTTCGATAG TCAATCGAGT
TTCAAATTCG ATTTGCAAGT ATATATCGAT AAGAAGCCAT CATTTTACAG CTTTGCAAAT
AAGACAAGTA TAATGACCGA GGCAGAGGTA ATAGCAAAAT ATGCACCCGA CCAAAACATA
TAA
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| Protein sequence | MTERKGQCLC GAVKFVAKNS ENSVAACHCG MCRTWGGGPL MAVSCGSDVS FEGKENISVY
SSSDWAERGF CKNCGSHLFY RLKQISEYQL SAGLFDSQSS FKFDLQVYID KKPSFYSFAN
KTSIMTEAEV IAKYAPDQNI
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