| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1048 |
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| Symbol | |
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| ID | 5612032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1244631 |
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| End bp | 1245536 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640931896 |
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| Product | ribokinase |
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| Protein accession | YP_001472787 |
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| Protein GI | 157374187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGAC TCGTCATTTT AGGCAGTGCC AATGCCGACC ATGTGATGTC ATTTGAATAT
CTGCCCGCCC CCGGGCAGAC TTTGATGAGC AAGGATTATC GATTCGAACA CGGTGGGAAA
GGCGCAAACC AGGCCGTTGC CTGCGCCAGA CTATGCCAAG CCGGCAATCG AATCGATTTT
ATCTGTCACC TGGGAGCCGA CGGCATTGCC GACCAGATGT GTCAGAGTTG GCATGATGAC
GGTATTCACT CCGATGGGAT CACTAAGGTC AATGGGCTAA GCACGGGCAC CGCCATGATT
TTTGTCGGCG CAAATGGCGA GAATAGTATC GGGGTTTCAC TGGGTGCCAA TGCCAGTATG
ACGACTGAGG CACTCGAGAA ACACCAGACG TTATTAGCAC AAGCCGATTG GTTTCTGGTG
CAACTGGAAA CCCCGACAAC AACCGTTGCT CAGGCGCTGA AGTCGGCGAA AAAACATGGC
GCAAATACCC TGCTTAATCC TGCCCCCGCG ACTGTGCTCG GCACAGAGAT CTACAGATGG
GTCGACATTA TCACCCCAAA TGAGACCGAA GCCGAGGCGA TAACGGGGAT TGAGGTCTGT
GATGAGAATA CGGCAAGGCT CGCGGCTCAA ATGCTTCATC AACTCGGGCC TGAGACGGTG
ATCATCACCT TAGGCTCCCG AGGTGCGTAT TTAAGCTGTT CAGAGTTTGA AGGCGTAGTC
GCCGGCGTAG ATGTTAAACC AGTCGATACC GTCGCCGCCG GAGATACCTT TAACGGGGCC
TTGATGGTGG CTTTGAGTGA AAACCTGGCG ATGCGTGATG CGGTAGAGTT TGCTAACCGA
GCCGCAGCCA TAGCAGTAAC CCGGCCCGGA GCACAGAGAA GCATCCCCTA CCGTCACGAA
CTTTAA
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| Protein sequence | MSRLVILGSA NADHVMSFEY LPAPGQTLMS KDYRFEHGGK GANQAVACAR LCQAGNRIDF
ICHLGADGIA DQMCQSWHDD GIHSDGITKV NGLSTGTAMI FVGANGENSI GVSLGANASM
TTEALEKHQT LLAQADWFLV QLETPTTTVA QALKSAKKHG ANTLLNPAPA TVLGTEIYRW
VDIITPNETE AEAITGIEVC DENTARLAAQ MLHQLGPETV IITLGSRGAY LSCSEFEGVV
AGVDVKPVDT VAAGDTFNGA LMVALSENLA MRDAVEFANR AAAIAVTRPG AQRSIPYRHE
L
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