Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1045 |
Symbol | |
ID | 5610176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1240591 |
End bp | 1242102 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640931893 |
Product | aldehyde dehydrogenase (NAD(+)) |
Protein accession | YP_001472784 |
Protein GI | 157374184 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.154048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAC CTACAAATCG CAATCAATGG CAAAGCTTGG CCGATAAGTT AATCAGTGAA GGGGAGATTA AGTCCTCTGC ATTTATCGAT GGCGAATATC TTCCTTCGGT ATCGGGTGAG ACCTTTGAAT GTGTGAGTCC CATAGATGGC CGGATACTCT GTCACGTCGC CAGTTGCTCG TCCCAAGATG CCGATATTGC CGTAAGCAGT GCAAGGCAAG CGTTCGATGA GGGGAGTTGG TCGGCTCTGC CACCGGTAAA ACGCAAACAG ATAATGATAC GTTTCGCCGA TCTACTCGAA CAGAATCAAG ATGAACTCTC CTTGCTAGAG ACATTGGATA TGGGTAAACC CATCCGCTAT TCAGGCTGCG TCGATGTGGC GGGCGCTGCA CGCGCCATTC GTTGGTCCGG TGAGGCTATC GATAAAATTT ATGATGAGAT AGCCCCGACG GCGCCAAATG AGATAGGCAT GATCACCCGC GAGCCCGTTG GCGTGGTGGC GGCTATCGTG CCGTGGAACT TCCCTATCTT GATGGCGTGT TGGAAATTGG GCCCGGCTCT GGCGACGGGC AATAGTGTCA TCTTAAAGCC TTCGGAGAAG TCACCTTTAA CGGCGATTCG TATGGCTCAG ATAGCCATAG AAGCCGGGAT CCCCAAGGGG GTATTGAACG TGCTTCCGGG CTTTGGTCAT ACCGTCGGCA AGGCATTGGC CCTGCATATG GATGTGGATA CTCTGGTATT TACCGGTTCG ACTAAAATCG CCAAACAGCT GATGATCTAC GCCGGTGAGT CAAACATGAA ACGGGTTTGG TTAGAGGCCG GTGGCAAAAG CCCTAATATC GTCTTCAACG ATGCGCCGAA TCTGCAAAAA GCGGCCGAAG CCGCCGCTTC TGCCATTGCC TTTAACCAGG GAGAGGTCTG TACTGCAGGT TCACGTCTAC TGGTCGAGGC GGGGGTTAAA GATGAGCTGC TTGACCTGAT TGCGAAAGAG TTGCTTGCCT GGCAGCCCGG TCATCCTCTG GATCCCGAGA CGACCTGTGG CGCCGTTGTC GACAGGCAGC AGCTGGACAA TGTGCTGAGT TACATTCGAT CCGGCGTCGA GGAGGGAGCC GAGCTTATTC AGGGCGGCGG TCAGGTGATG GCCGAGAGCG GTGGCGTGTA TGTCGAGCCA ACCATCTTCT CTGAGGTGAA TAATAAAATG ACGATCGCTA AAGAGGAGAT CTTTGGCCCG GTACTGTCGG TGATCACCTT CGATGGAATG GAGCAGGCGA TAGAGATAGG AAATGACAGC ATTTATGGCC TGGCAGCCGG CGTGTGGACC TCAGATATCA GCAAGGCCCA TAAGACGGCG AAGGCATTGC GTAGTGGTAT GGTATGGATT AACCACTATG ACGGCGGCGA CATGACGGCA CCGTTTGGTG GTTATAAGCA GTCGGGTAAT GGCCGTGACA AGTCACTGCA TGCGTTCGAT AAGTACACCG AAATGAAGGC GACCTGGATT GCACTAGATT GA
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Protein sequence | MSTPTNRNQW QSLADKLISE GEIKSSAFID GEYLPSVSGE TFECVSPIDG RILCHVASCS SQDADIAVSS ARQAFDEGSW SALPPVKRKQ IMIRFADLLE QNQDELSLLE TLDMGKPIRY SGCVDVAGAA RAIRWSGEAI DKIYDEIAPT APNEIGMITR EPVGVVAAIV PWNFPILMAC WKLGPALATG NSVILKPSEK SPLTAIRMAQ IAIEAGIPKG VLNVLPGFGH TVGKALALHM DVDTLVFTGS TKIAKQLMIY AGESNMKRVW LEAGGKSPNI VFNDAPNLQK AAEAAASAIA FNQGEVCTAG SRLLVEAGVK DELLDLIAKE LLAWQPGHPL DPETTCGAVV DRQQLDNVLS YIRSGVEEGA ELIQGGGQVM AESGGVYVEP TIFSEVNNKM TIAKEEIFGP VLSVITFDGM EQAIEIGNDS IYGLAAGVWT SDISKAHKTA KALRSGMVWI NHYDGGDMTA PFGGYKQSGN GRDKSLHAFD KYTEMKATWI ALD
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