| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1029 |
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| Symbol | |
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| ID | 5610204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1225968 |
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| End bp | 1226438 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931877 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001472768 |
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| Protein GI | 157374168 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000502229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.627459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC TACTCGCTAT TGTCGTCATC GCCGGTGTTA TCTTTTACTA CTTCACCTCG
ATGAATAATC AAAAAGCCGC ACAGGAAAAT ATCAAGATAG GCAGTGCTTT CCTCGCCGAG
AACAAGGTCA AAGAGGGAGT GACTACAACC GATTCAGGAC TTCAATATCA AGTATTAGCG
AAGGGGGATG GCACCAGTCA CCCGAAAGCG AGCGATACCG TGACCGTGCA TTACCATGGC
ACATTGATCG ATGGCACCGT ATTTGACAGT TCAGTAGAGC GAGGCGAGCC GATCGACTTC
CCTCTAAACC GTGTGATCAA GGGGTGGACA GAGGGCGTTC AGTTAATGGT TACGGGTGAG
AAAACCCGCT TCTTCATTCC AAGCGAACTG GCCTATGGAA ATCGTAATGC GGGGAAAATT
ACCGGCGGTT CGGTACTTAT CTTCGATGTC GAGTTAATCA GCATAGATTA A
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| Protein sequence | MKILLAIVVI AGVIFYYFTS MNNQKAAQEN IKIGSAFLAE NKVKEGVTTT DSGLQYQVLA
KGDGTSHPKA SDTVTVHYHG TLIDGTVFDS SVERGEPIDF PLNRVIKGWT EGVQLMVTGE
KTRFFIPSEL AYGNRNAGKI TGGSVLIFDV ELISID
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