| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1020 |
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| Symbol | |
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| ID | 5609947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1213148 |
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| End bp | 1214638 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931868 |
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| Product | carboxypeptidase Taq |
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| Protein accession | YP_001472759 |
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| Protein GI | 157374159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2317] Zn-dependent carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.16508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CCAACCTAAG CCCCCATTAC GACAGGCTCA CAAAACATTT TCAGACAATC
TCTCATTTCG AACACCTGAG TGCTCTGGGT GACTGGGATC AGGCGACGAT GATGCCAGTC
GGCGGAGGCG CCGCCCGCGG CGCTGCGATG GCTGAGTTAG CCAAACATAT TCACGAGCTA
AAAACAGCCC CTTTCCTTGC CGACACACTA CAACTTGCTC AAGATGAGAT GCTAACTCGC
GAGCAAGCTG CGAACCTGAA AGAGATGAAT TATCAATTTT TTCAGGCCAA CGTGATCCCC
GCATCACTGG TTAAGGCTAA GACTGAGCTC GCCTACCGAT GTGAACATGC CTGGCGTGAT
CAGCGCAAGA ATAATGACTG GCAGGGGTTC AGACCTAATC TCGAAGCCTT GATGGCACTC
GTTAAAGAGG AGGCGAATAT CCGTTCACAG GCACAAGGCT TATCACCTTA TGATGCCCTA
CTGAACAAAT TTGAACCAGG CATGACGACC GAGCGTCTCG AATCGGTATT TGGTCACCTT
AAAACCTGGC TGCCCTCGCT TATTCAGCGA GTTCAGCATG AACAGGCCAA AGAGCACAGG
TTTAATATCG AATCCTGCGG CAGTCAGGCT CAGGAGACAC TGGGACGAGA GGTGATGGAC
TTTCTCGGAT TTGATTTTAC TCAGGGTCGA TTAGATGTCA GTAGCCATCC CTTTTGTGGT
GGGGTGCCCG GTGATGTTCG CCTGACGACC CGCTACGATG AGTCCGATTT CACCAGCGCC
TTAATGGGGG TTATCCATGA GACGGGCCAT GCCAGATATG AGCAGGGGTT ACCGGTTAAC
TGGCGAGGAC AGCCTGCCGG CCATGCTCGC TCGATGGCTA TCCATGAGAG CCAGAGTCTG
TTCTGTGAAA TGCAACTGGG ACGCGGCAGC GGATTCCTCT CCCATTTACA ACCCAAAATA
GCCAAACACT TAGGTAGCCA ACTTTCAACG GAGCAACTGA CCAATATCTA CACCCGGGTT
AATCCTGGTC TTATCAGGGT CGATGCCGAT GAGATCACCT ACCCTTGTCA TGTCCTACTC
AGATTCGAAG CCGAGAAAGG CTTAATCGAT GGCAGTCTCA GTGTCGCCGA TCTGCCAGAA
TTCTGGGCCC AGCAGATGAG TTCGTTATTA GGCGTTAACA CCCAGGGCAA CTTTAAAGAT
GGTTGCATGC AAGATATACA CTGGGCCGTG GGCGAACTTG GATACTTCCC CAGTTACACC
TTAGGCGCTA TGTATGCGGC TCAATTTCGT TTTGCCATGG AGGCGAGCTT AGGCTCGGTG
GACACCTTGG TTGCCCAGGG AAATATCGCT CAAATATTTG AGTGGCTGGA ACAGAAAATT
TGGTCACAGG GAAGCCTGTT AAATACAGAC GAACTGGTCA AACAGGCCAC AGGCGAAACT
CTGAACCCCG ATTATTTCAA ACGACACCTG GAGCAAAGGT ATCTGAAATA A
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| Protein sequence | MTQPNLSPHY DRLTKHFQTI SHFEHLSALG DWDQATMMPV GGGAARGAAM AELAKHIHEL
KTAPFLADTL QLAQDEMLTR EQAANLKEMN YQFFQANVIP ASLVKAKTEL AYRCEHAWRD
QRKNNDWQGF RPNLEALMAL VKEEANIRSQ AQGLSPYDAL LNKFEPGMTT ERLESVFGHL
KTWLPSLIQR VQHEQAKEHR FNIESCGSQA QETLGREVMD FLGFDFTQGR LDVSSHPFCG
GVPGDVRLTT RYDESDFTSA LMGVIHETGH ARYEQGLPVN WRGQPAGHAR SMAIHESQSL
FCEMQLGRGS GFLSHLQPKI AKHLGSQLST EQLTNIYTRV NPGLIRVDAD EITYPCHVLL
RFEAEKGLID GSLSVADLPE FWAQQMSSLL GVNTQGNFKD GCMQDIHWAV GELGYFPSYT
LGAMYAAQFR FAMEASLGSV DTLVAQGNIA QIFEWLEQKI WSQGSLLNTD ELVKQATGET
LNPDYFKRHL EQRYLK
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