| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1004 |
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| Symbol | |
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| ID | 5610062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1190429 |
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| End bp | 1191241 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931852 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472743 |
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| Protein GI | 157374143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1355] Predicted dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGCT CGATTCGCCA GGCCGCCGTG GCCGATCTTT TCTATCCGGC AGATCCCGTC
GAACTGACGG CTCAAATCAA ACAATTCCTC TGCGCGACTA ACGACAAATG CGGTGAACAG
GGAATAAAGC CCGGCGGCAA GCAGCGACCT AAGGCACTCA TCGTTCCCCA TGCGGGATAT
ATCTATTCCG GGGCTGTAGC CGGACGCGCT TTCGCTCGCC TCCTTGACGA TAATAAGATA
GAGACGGTGG TTTTACTGGG GCCGGCACAT CGAGTCTACC TCCAAGGCTG CGCCCTCCCC
GAGGCCAACA CCTTTGCGAC CCCCTTAGGG AAAATACCCA TTGAGCAGCA GAACTATGAA
GCGTTAAGCG CCTTAGACGC CGTGACCATC TCAGATCTAC CACACCTCGA TGAACATTGT
CTGGAGGTGC AGCTGCCATT TTTGCAGCTT TGTCTGCAGC GATTTAAATT GCTTCCCATC
GTGGTGGGTG AATGCTCCCC CTCTGTGGTG GCCGATATTC TGGAGCTGTT TAGCCAACGG
GAAAATACCT TGATAGTGGT GAGTACAGAT CTCAGCCATT ACCACACCTA TGACGAGGCC
TGCAGGCTCG ACAGACAGAC CTGTGAACAG ATATTGGACT TAAGCACGCA AATATCATCT
CATCAGGCTT GTGGCTGCTA TGCCCTCAAT GGGCTGAACA TGTATGCTAA ACGCCACGAG
CTGGCCATTA AGCAAATATG TTACCTCAAC TCCGGCGACA GTGCCGGTGA TAAGAGTAAG
GTGGTAGGCT ATGCCAGCTT CGCCCTGTAT TAA
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| Protein sequence | MLSSIRQAAV ADLFYPADPV ELTAQIKQFL CATNDKCGEQ GIKPGGKQRP KALIVPHAGY
IYSGAVAGRA FARLLDDNKI ETVVLLGPAH RVYLQGCALP EANTFATPLG KIPIEQQNYE
ALSALDAVTI SDLPHLDEHC LEVQLPFLQL CLQRFKLLPI VVGECSPSVV ADILELFSQR
ENTLIVVSTD LSHYHTYDEA CRLDRQTCEQ ILDLSTQISS HQACGCYALN GLNMYAKRHE
LAIKQICYLN SGDSAGDKSK VVGYASFALY
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