| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1001 |
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| Symbol | |
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| ID | 5610055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1185661 |
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| End bp | 1186221 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931849 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472740 |
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| Protein GI | 157374140 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGA CTAAAGTTGA AATTCGCCTC ATTGTGGAGC GAGAGCTCGA GCAATTCTTT
GCCTATTTGA GTGAGCAATT ATCAGAGAAT GGACAGGGCG ATGGCCCGCT TTTTCAGCCT
ATGTCCCGGC GCTCTACAGG TTTAACCACT GAGATGGAGC AGCGCTTCAC GTCAGGAATG
ACCGTCGATT TCCCACAATC TGGCTGGCGA CGAGTCTGGG GAGCATTCGA TAAGCATGGA
GTCATCATGG GTCATATCGA TCTTCGTGGT CATCCGGAGG CCCACACGCA GCACAGGGCC
TTGCTTGGCA TGGGCGTACA TCGAGATGCC AGACGCATGG GATTGGGTCA AAAACTGATA
AGAACCGTCA AACAGTGGGC TAAAGATGAA GCCGGAATCG AGTGGATCGA TCTCTGGGTG
CTATCCGAAA ACTTGCCTGC TGTCGGTCTC TATCAAGCGA CGGGTTTTAT CAAAAATGGT
GAGCTTGAAG ATATGTTCAG GATAGATACC CGCTCCTATG CATTTACACG AATGAGCCTT
CGCCTGAGAG GTGAGCATTG A
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| Protein sequence | MEETKVEIRL IVERELEQFF AYLSEQLSEN GQGDGPLFQP MSRRSTGLTT EMEQRFTSGM
TVDFPQSGWR RVWGAFDKHG VIMGHIDLRG HPEAHTQHRA LLGMGVHRDA RRMGLGQKLI
RTVKQWAKDE AGIEWIDLWV LSENLPAVGL YQATGFIKNG ELEDMFRIDT RSYAFTRMSL
RLRGEH
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