| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0983 |
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| Symbol | |
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| ID | 5610260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1165490 |
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| End bp | 1166374 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931831 |
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| Product | MltA-interacting MipA family protein |
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| Protein accession | YP_001472722 |
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| Protein GI | 157374122 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0175299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC TAAAAGTGCT TCTGCTAAGC TGCATCCTTT TCCCCATATC GGCCTGGGCC
GATGTGGTGG ACTCCTGTGG AGAAAAGGTT GAATGTATCG AAATTGGCAG ATGGGATGTA
GGCATCGCAC TTGGCTATGG TAACAGAACC AATCCTCTTA AAGATTATGA CGATATACCT
ATCTATTTAG TGCCGACCTT TGCTTATTAC GGAGACACCT GGTTCTTCGA AAATGGCAAC
TTTGGTTACA CTCTCTCCGA ACAGGAGAAG TTCACGATAA ACCTGACCAC GAGTCTCAGC
AGCGATAGTG CCTATTTCCA TCGCTGGGAC CCTTCAAATA TCTTTATTGC CGGCACCAAT
AAATTTGAGC CAAGATCATT ATTGTCCTCG ACGGCACCAA CACCCACGAT ATTAAAAGCG
GCGCAGGAAC CTGAGATTGG TGAATTAGAG AAGCGACACT TTACCTACTT TGGTGGTGTA
GAGGCTTTTT TCTACACCCG TGCAGGCACG ATTAACCTCT CGTTGGCACA TGACCTGTTA
AATGTGCACC AGGGAACGGA AGCTAAGCTA AAATGGCTTT ACAACCTGGC TATCGAAGAT
TGGAAATTTG AATTGGCCCT CACTCTTGAT TGGAAGAGTG AAGAGCTTGT AGATTATTAC
TATGGTATCA GACCCGGCGA GAGTCGCTAC TGGAGTCAGG CGTATCAAGC CAAATCAGCA
CTCAATACCG GGGTTGAACT AACGAGTCAT TATGTAATAA CAGAGCATTG GGATCTGCTT
TTTTTAGCCA GATACACACA AATCGGTGAC GAAATTGTTG CAAGTCCCCT GCTAAATGAA
GACTATACCA GTACCTTTTT TGTCGGCGCA GCCTATAGGT TTTAA
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| Protein sequence | MTKLKVLLLS CILFPISAWA DVVDSCGEKV ECIEIGRWDV GIALGYGNRT NPLKDYDDIP
IYLVPTFAYY GDTWFFENGN FGYTLSEQEK FTINLTTSLS SDSAYFHRWD PSNIFIAGTN
KFEPRSLLSS TAPTPTILKA AQEPEIGELE KRHFTYFGGV EAFFYTRAGT INLSLAHDLL
NVHQGTEAKL KWLYNLAIED WKFELALTLD WKSEELVDYY YGIRPGESRY WSQAYQAKSA
LNTGVELTSH YVITEHWDLL FLARYTQIGD EIVASPLLNE DYTSTFFVGA AYRF
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