| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0981 |
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| Symbol | |
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| ID | 5609599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1164352 |
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| End bp | 1165065 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931829 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001472720 |
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| Protein GI | 157374120 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0593139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAGC CTCAATCGAC CCATAGAGTT TTACTGGTAG AAGACGACAT TCGTCTCGCG
AACCTGATTG TCGATTATTT AAAGTCGCAT GGAATGCACG TAGAAGTTGA GCGCCGGGGA
GATACGGTTC TAACTCGGTT AATCAGCTAC AAGCCTGATA TTATTCTATT GGATATCATG
TTACCCGGAA TGGATGGTCT GACACTGTGT GAAAAGTTAC CTGACTACTT TGCCGGCCCC
ATTCTACTCA TGAGTGCGCT TGGCTCAAAT GAGGATCAGA TCAAAGGACT GGAGTTAGGT
GCCGATGACT ACGTTGTTAA ACCTGTCGAT CCTGCTCTTC TGATCGCCAG AATTAACAAT
CTGTTACGCC GCAACGCTAA GCCGCCTAAG GTTGAATCTC ACTGCCTGAG CTTTGGTAAA
TTAAGTATCG ATCCACACAC ACAGGCAATC AGGCTCGGTG ATATTGAAGT CGATCTGACC
AGCCATGAGT TTGAGCTGCT CTGGTTATTG GCTTCACAGG CAGGACAAGT ATTGAGCCGC
CAATATATCT ACCAATACCT GCTCAATATT GATTTTGACG GTAAGGATAG AAAAATAGAT
GTCAGAGTCT CCCGTCTGAG AAAGAAATTG GGCGATAATA TCGAGACGCC ATTTAGGATC
AAGACAGTTT GGGGACAAGG ATATCTATTT GCCCCTGAAG CTTGGAGCAA CTAG
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| Protein sequence | MTEPQSTHRV LLVEDDIRLA NLIVDYLKSH GMHVEVERRG DTVLTRLISY KPDIILLDIM
LPGMDGLTLC EKLPDYFAGP ILLMSALGSN EDQIKGLELG ADDYVVKPVD PALLIARINN
LLRRNAKPPK VESHCLSFGK LSIDPHTQAI RLGDIEVDLT SHEFELLWLL ASQAGQVLSR
QYIYQYLLNI DFDGKDRKID VRVSRLRKKL GDNIETPFRI KTVWGQGYLF APEAWSN
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