| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0973 |
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| Symbol | purT |
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| ID | 5614234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1156025 |
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| End bp | 1157200 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931821 |
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| Product | phosphoribosylglycinamide formyltransferase 2 |
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| Protein accession | YP_001472712 |
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| Protein GI | 157374112 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
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| TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000246757 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGAA CACCACATTC AAATGGCGCG CTTCGCGCCA TGCTTCTCGG CTGCGGCGAA
CTCGGTAAAG AGGTCGCAAT CGAACTACAA CGCATGGGAG TCGAAGTGAT CGGTGTCGAC
CGGTACCCTA ACGCTCCGGC GATGCAGGTC GCCCACCGAT TTCATGTCAT CAATATGCTC
GATGGCGATG CACTGAGCAA CATTATTGAA CAGGAGCAAC CTCATCTGGT TATTCCTGAA
ATTGAGGCCA TTGCCACTCA AACCTTAGTT GAGATGGAAG CGGAAGGTGT CAATATCGTG
CCTACCGCTA AAGCCACTAA GCTGACCATG GACCGAGAAG GGATCAGACG GCTGGCGGCA
GAAACCTTGG GCCTGCCGAC CTCACCCTAC TTTTTTTGCG ATACACAAAC CGAGTTTGAG
CTGGCCATCG AAAACATTGG CATGCCCTGC GTTGTAAAAC CTGTGATGAG CTCATCGGGT
AAAGGACAGA GTGTCATCAA AGAGGCCGGG CAAGTGCTCA GCGCCTGGAA CTATGCTCAA
GAGGGAGGCC GTGCAGGTGG TGGCCGAGTC ATTGTCGAAG GCTTTGTCTC CTTCGATTAC
GAGATCACCC TACTCACCAT CAGCGCCGTT AATGGCATCC ATTTTTGCGA CCCCATAGGT
CACAGGCAGG AAGATGGCGA CTATCGTGAA TCATGGCAAC CTCAGGCCAT GTCGCCTCAG
GTATTGGCTA AGTCACAAGA GATAGGTCGT AAGGTCGTCG AAGCTTTGGG GGGTTATGGC
TTATTCGGCG TCGAACTGTT TATTAAGGGC GATGAAGTCT ATTTCTCTGA AGTTTCTCCC
CGTCCACACG ATACGGGACT TGTGACCTTA ATCAGCCAGG ACCTATCTGA ATTTGCCCTG
CATGCACGCG CCATTCTTGG TTTACCCGTC TCCAATATTG CCCAGCATGG CCCAAGCGCT
TCGGCAGTGA TTCTGGCAGA GGGACAATCT CACAATATTC GCTATCAGGG AATGGCTGCG
GCGCTACAAG CCCCTGACAC CCAGTTACGT CTATTCGCAA AACCTGAGAT CGATGGACGT
CGCCGTCTGG GTGTCGCCTT AGCCCGCGGG GAAAGCATCG ATAAGGCGAT AGATAAGGCG
CTGGTTTGCG CCGGTAAGGT TGAAGTTATT TTATAG
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| Protein sequence | MIGTPHSNGA LRAMLLGCGE LGKEVAIELQ RMGVEVIGVD RYPNAPAMQV AHRFHVINML
DGDALSNIIE QEQPHLVIPE IEAIATQTLV EMEAEGVNIV PTAKATKLTM DREGIRRLAA
ETLGLPTSPY FFCDTQTEFE LAIENIGMPC VVKPVMSSSG KGQSVIKEAG QVLSAWNYAQ
EGGRAGGGRV IVEGFVSFDY EITLLTISAV NGIHFCDPIG HRQEDGDYRE SWQPQAMSPQ
VLAKSQEIGR KVVEALGGYG LFGVELFIKG DEVYFSEVSP RPHDTGLVTL ISQDLSEFAL
HARAILGLPV SNIAQHGPSA SAVILAEGQS HNIRYQGMAA ALQAPDTQLR LFAKPEIDGR
RRLGVALARG ESIDKAIDKA LVCAGKVEVI L
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