Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0970 |
Symbol | djlA |
ID | 5611522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1153396 |
End bp | 1154175 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640931818 |
Product | Dna-J like membrane chaperone protein |
Protein accession | YP_001472709 |
Protein GI | 157374109 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0207673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT GGGGTAAATT TTTTGGCTTC GCTATCGGCT TCATGTTTGG TCGAATCATT GGTGGCTTGA TTGGTCTCTG GTTGGGCCAT CTTTATGATA AGAAAAGTGC CGAGCTAAGT GGCATCATAG GCAAAGGCGC TAACAGGCAG ACACTCTTTT TTAATACAAC TTTTGCCGTG ATGGGGCACG TGGCGAAAGC CTCGGGTCAA GTCACCGAAA ATGATATCCG TATCGCGACC TTGTTGATGG ATCAGATGCA ACTCAAGGGC GAGGCGAGAA AAGAAGCTCA GGTGGCGTTT AAAGAGGGTA AAGAGAGTGA CTTCGATATT AAGGCTTGCC TTAAGACATT TCGACTCATC TCTATGGGAC GTAAAGAGTT GTTGCAGATG TTTCTGGAGA TCCAGATCCA GACGGCTTTA TCTGACGCAA GACTCGACCC TAAGGAGCGC TCGGTTCTAT TAACCGTGGC TCAGGAGTTA GGATTTAGTG CCAGTCAGCT TGATGAACTG CTTAAGCGTT GGCAGGCTGA ATTTAATTTC CACCAAGGTG GCAATAATCA GCAGACCACG ATTGAAGATG CCTATGATCT ACTCGGAATG TCGGAAGCGT CATCGGATCA GGAGGTCAAA CGTGGCTATC GTAAATTGAT GAATGAGCAT CATCCCGATA AGTTGGTCGC TAAAGGTTTG CCGGAGGAGA TGATGGAGTT AGCTAAAATA AAAGCGCAGG ACATCCAGGC GGCCTATGAC AGAGTGAAGA GCGACAGGGG AATGCGTTAA
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Protein sequence | MRIWGKFFGF AIGFMFGRII GGLIGLWLGH LYDKKSAELS GIIGKGANRQ TLFFNTTFAV MGHVAKASGQ VTENDIRIAT LLMDQMQLKG EARKEAQVAF KEGKESDFDI KACLKTFRLI SMGRKELLQM FLEIQIQTAL SDARLDPKER SVLLTVAQEL GFSASQLDEL LKRWQAEFNF HQGGNNQQTT IEDAYDLLGM SEASSDQEVK RGYRKLMNEH HPDKLVAKGL PEEMMELAKI KAQDIQAAYD RVKSDRGMR
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