Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0960 |
Symbol | |
ID | 5610590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1141954 |
End bp | 1142340 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931808 |
Product | hypothetical protein |
Protein accession | YP_001472699 |
Protein GI | 157374099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGT TACCAACGAC CCTTGCTGTG GTTATCGCAG CGTCTACTTT CTCTATTCCT GCACAAGCTA ACGATCAGCT GGCGGCTAAT ATATGTAACT ATGTGCAAGC TGATGATAAG AATCGTCTGC GTAAAAAATT AAAAGAGAAC CGAGTAAAGT TACGCAATAT CTATAGTGGT ATCTCATGTA ATGGAGATAG CCTTCTTCGT ACGGCGATGA AGAGTGGTTC AGATAAGGTA GGCAAATTTG TCGCTAAACG CCTCTCTGTA ACGGATTTAA AGGCGGCAGA AGCCGATGGA GTGACGATTG TGCAGTGGTC CGAGGTAAAT GGACATGGCG GCAGTGCGAT TACGGCTGCC ATTAACGAGC GTATAGCAGG CAGTTAG
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Protein sequence | MRLLPTTLAV VIAASTFSIP AQANDQLAAN ICNYVQADDK NRLRKKLKEN RVKLRNIYSG ISCNGDSLLR TAMKSGSDKV GKFVAKRLSV TDLKAAEADG VTIVQWSEVN GHGGSAITAA INERIAGS
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