Gene Ssed_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0960 
Symbol 
ID5610590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1141954 
End bp1142340 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content46% 
IMG OID640931808 
Producthypothetical protein 
Protein accessionYP_001472699 
Protein GI157374099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TACCAACGAC CCTTGCTGTG GTTATCGCAG CGTCTACTTT CTCTATTCCT 
GCACAAGCTA ACGATCAGCT GGCGGCTAAT ATATGTAACT ATGTGCAAGC TGATGATAAG
AATCGTCTGC GTAAAAAATT AAAAGAGAAC CGAGTAAAGT TACGCAATAT CTATAGTGGT
ATCTCATGTA ATGGAGATAG CCTTCTTCGT ACGGCGATGA AGAGTGGTTC AGATAAGGTA
GGCAAATTTG TCGCTAAACG CCTCTCTGTA ACGGATTTAA AGGCGGCAGA AGCCGATGGA
GTGACGATTG TGCAGTGGTC CGAGGTAAAT GGACATGGCG GCAGTGCGAT TACGGCTGCC
ATTAACGAGC GTATAGCAGG CAGTTAG
 
Protein sequence
MRLLPTTLAV VIAASTFSIP AQANDQLAAN ICNYVQADDK NRLRKKLKEN RVKLRNIYSG 
ISCNGDSLLR TAMKSGSDKV GKFVAKRLSV TDLKAAEADG VTIVQWSEVN GHGGSAITAA
INERIAGS