| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0956 |
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| Symbol | obgE |
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| ID | 5612547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1138849 |
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| End bp | 1140009 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931804 |
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| Product | GTPase ObgE |
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| Protein accession | YP_001472695 |
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| Protein GI | 157374095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG TCGATGAAGC TGTGATCAGA GTTGAAGCTG GTGATGGTGG TAGTGGTTGC
GTGAGTTTCA GACGCGAAAA ATATGTACCC GATGGCGGCC CTGATGGCGG CGATGGTGGT
GATGGCGGTA GTGTATATCT GCAAGCAGAT GAAAGTTTTA ACACACTAAT CGATTTCCAG
TTTGAACGTT TTCATCGTGC CGAGCGTGGT AAAAACGGCC GTGGTCGCGA CTGTACCGGT
CATGGTGGTG AGGACTTAGT TCTCAAGGTT CCTGTTGGCA CACGCGCTAT CGACGAAGAA
ACTGAAGAGT CTCTCGGAGA TTTAACTGCT CATGGTCAAA GAATGCTTGT GGCTAAAGGT
GGTTTTCATG GATTAGGTAA TACTCGCTTT AAGAGTAGTA CTAACCGCGC TCCAAGACAG
AAAACACTGG GAACTCCCGG TGAGGTTCGA AGCCTTAAGC TTGAGCTGAT GTTGCTTGCC
GATGTTGGTC TTCTGGGTAT GCCTAATGCT GGTAAATCAA CGTTTATCCG TTCGGTATCC
AGAGCCAAGC CTAAAGTCGC AGATTATCCT TTCACAACTT TAGTTCCTAA CCTTGGTGTT
GTTAACCCAA GACACGGTCA AAGTTTCGTT ATTGCCGATA TTCCTGGTCT AATCGAAGGT
GCTGCCGATG GTGCGGGTCT TGGTGTTCGA TTCTTGAAGC ACCTTGAGCG TTGTCGTGTG
TTGTTGCATC TTGTGGATAT CGATCCGATC GATGGCAGCG ACCCTATCGA GTCGGCAAGA
GCTATCGTTG GTGAGCTTGA AAAGCACTCA CCAAAGCTTG CGAGCAAGCC ACGCTGGTTA
GTGATCAATA AAAAAGATCT GCTGCTCGAA GAGGAACTTC AGGAACGTAT CGACCATATC
GTGAAAGAGT TAGAGTGGAA AGGCGAAGTC TTTACCATCT CAGCTTATAA TCGTGAAGGG
ACCGAAGAGC TTAGTTTGAA GCTTGTCGAC TTCATCGATT CACTTCCTGA AGAGGAAGAG
GTGGATGTAG AAGCCGAAGT CGAATTCAAG TGGGATAATT ATCATAAAGA CAGTGATTCG
TTAAATGAAG ATTTTGATGA TTCAGACGAT GATGACTTCG ATGACGATGA CTATGATGTT
GAAGTTATCT ATCAAAGATA G
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| Protein sequence | MKFVDEAVIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVYLQAD ESFNTLIDFQ
FERFHRAERG KNGRGRDCTG HGGEDLVLKV PVGTRAIDEE TEESLGDLTA HGQRMLVAKG
GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLKLELMLLA DVGLLGMPNA GKSTFIRSVS
RAKPKVADYP FTTLVPNLGV VNPRHGQSFV IADIPGLIEG AADGAGLGVR FLKHLERCRV
LLHLVDIDPI DGSDPIESAR AIVGELEKHS PKLASKPRWL VINKKDLLLE EELQERIDHI
VKELEWKGEV FTISAYNREG TEELSLKLVD FIDSLPEEEE VDVEAEVEFK WDNYHKDSDS
LNEDFDDSDD DDFDDDDYDV EVIYQR
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