| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0948 |
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| Symbol | |
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| ID | 5610879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1131459 |
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| End bp | 1133150 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931796 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001472687 |
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| Protein GI | 157374087 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA AATTAATAAT AACTGCAACC TTTTTCTCCA TGGGTGCGTG TGCCATGGAT
AGAGTTACTG GCGAGTCATT CGCCACACGT TCAGAGGTCT ACGCCACTAA TGGCATGGCG
GCGACGAGTC AGCCATTAGC CACACAGGTT GCGCTCGATA TTCTTAAGCT GGGTGGCAGC
GCCGTCGATG CTGCCATTGC CGCCAACGCT ATGCTCGGGC TCGTCGAACC TACAGGTGCT
GGGATCGGTG GCGATCTATT TGCCATTGTC TGGAGCGCTA AAGATAAACG CCTCTATGGA
CTCAACGCCT CAGGCAGAAG CCCCAAGAGC CTTACCTTAG ACAAAATACA AGCCTTAGGG
TTAGACTACC TTCCACCTTA TGGACCTATT CCTGTCTCTG TTCCCGGTGC TGTTGACGGC
TGGTTTGAGC TGCACGAGAG ATTTGGCAAG TTAGCTATGT CAGTAAATTT AGCGCCTGCA
ATCGACTACG CCCGTAAAGG CTTTCCAGTC TCTGAATTAA TTGCTTACTA TTTAGCGCGT
AGTGCCACAA AGTTAGCCAT ATTCCCCGGG TTCAAAGAGA CTTATATGCC TAGCGGCGCC
ATGCCTGAAG TTGGAGATAT TTTTAAGAAT CCTGCACTGG CATCGACCTA TGAGAAAATA
GCGGAGAAAG GGCGGGATGC TTTTTATAAA GGAGATATTG CCAGGACTAT TGCCAGCTAT
ATGGAAGCGC AGGGAGGTTA CCTCTCATAC GATGATTTAA GTGGACACTC CAGTGAATGG
GTTGATCCTG TTTCGGTTAA TTATCGTGGC TATGATGTTT GGGAGTTACC ACCCAATGGT
CAGGGAATTG CCGCGCTGCA GATCCTCAAA ACCCTGGAGC CCTTTGATCT AAAAGGGATG
GGGCAAGATA GCGCCGAATA TACACACCAT TTTGTTGAGG CCAAAAAGCT GGCCTTTGCC
GACCGAGCAA AATTTTATGC CGATACGGCG TTCAATAGCA TTCCGGTTTC TGAGCTTCTA
AGTGAAACAT ACAATTATCA ACGCTCAACA TTAATTAATG CTAACAGGGC CGCTAAGCGT
GTCGATGCCG GCCATCCGGC GTTGCAGCAT GGTGATACTG TGTACCTGAC TACCGCCGAT
AGGGAGGGCA ACATGGTCTC TCTTATTCAG AGTAATTATC GCGGTATGGG CTCAGGGATG
ACGCCACCTA GTTTAGGATT TGTTCTGCAG GACCGTGGTC AACTGTTCGA CCTTAAGCCG
GGACGCTTTA ATAGCTACGC CCCGGGTAAG AGGCCTTTTC ATACCATCAT TCCGGCATTT
GTCACCAAAG ACAATAAACC TTGGTTGAGT TTTGGAGTCA TGGGAGGGGC TACTCAGCCG
CAGATGCATG CACAAGTTTT AATCAATCTG ATCGACTTTG ATATGAATTT GCAGGAAGCG
GGAGACGCAC CTAGAATTCT TCATACTGGC TCGTCTCAGC CGACGGGAGA GCAGATGTTA
GATGGTGGAT ATATCAGCTT AGAGTCAGGC TTTGATATGA AGGTACGCAG AGAACTGCAG
AAGAAAGGGC ATGTTATTCG CGATAGTCTT GGTGCCTTTG GTGGATATCA AGCCATTTCG
ATAAATACTG AAACAGGTGT TTATAGAGGG GCATCAGAGA GTCGGAAAGA TGGCCAAGCG
GCAGGATATT AG
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| Protein sequence | MLKKLIITAT FFSMGACAMD RVTGESFATR SEVYATNGMA ATSQPLATQV ALDILKLGGS
AVDAAIAANA MLGLVEPTGA GIGGDLFAIV WSAKDKRLYG LNASGRSPKS LTLDKIQALG
LDYLPPYGPI PVSVPGAVDG WFELHERFGK LAMSVNLAPA IDYARKGFPV SELIAYYLAR
SATKLAIFPG FKETYMPSGA MPEVGDIFKN PALASTYEKI AEKGRDAFYK GDIARTIASY
MEAQGGYLSY DDLSGHSSEW VDPVSVNYRG YDVWELPPNG QGIAALQILK TLEPFDLKGM
GQDSAEYTHH FVEAKKLAFA DRAKFYADTA FNSIPVSELL SETYNYQRST LINANRAAKR
VDAGHPALQH GDTVYLTTAD REGNMVSLIQ SNYRGMGSGM TPPSLGFVLQ DRGQLFDLKP
GRFNSYAPGK RPFHTIIPAF VTKDNKPWLS FGVMGGATQP QMHAQVLINL IDFDMNLQEA
GDAPRILHTG SSQPTGEQML DGGYISLESG FDMKVRRELQ KKGHVIRDSL GAFGGYQAIS
INTETGVYRG ASESRKDGQA AGY
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