| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0944 |
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| Symbol | |
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| ID | 5611153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1126601 |
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| End bp | 1127194 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931792 |
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| Product | glutathione S-transferase domain-containing protein |
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| Protein accession | YP_001472683 |
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| Protein GI | 157374083 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCT TCTATTCAGA TGCTTCTCCC TATGCTCGTT GTGTTCGGGT TGTTATTCGC
TATCTCGAAA TTGACGGTAT CGATGAGTTA AAAACAGATC CCTTCGATAA TAGTGAGGCA
TTGCTTCAAG CCAATCCACT GGGGAAGATC CCCTGTCTTC AGCTCAATGA TGGCTCAGCC
ATTTATGACA GTGAGGTGAT ATTACGCTTC TTTGATTTTG AATTTGGCAG GAGCCAATTG
TTTGGAGCGG GTGTTCATGA TTGGAGAAAC GAAAGCCACT TTTCATTAAT CAAAGGAATG
TTAGATAGCG CCGTTGCATT AAGACAGGAG CAGTTGAGAG AGGAGGGGAA GCGGTCCTTA
TTTTGGACAG CAAGACATGA GCAAGCCCTG TTTAGGGGGC TAAAGCAACT CGAGCGTTCA
GGTGTGATAT CAAGACCCCG TCTGGTTATT CAGCAGATCA GTTTAGCCTG TTTATTAGAG
TATTTGGATT TCAGGCATCC CGATATTAGT TGGCGAAAAC TTGCGCCCGC GATCTCCAGT
TGGCTTTCGG ACTTTGAAAC CGAACCGGCG ATGCAGAGTA CCAGACCCAG TTGA
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| Protein sequence | MKLFYSDASP YARCVRVVIR YLEIDGIDEL KTDPFDNSEA LLQANPLGKI PCLQLNDGSA
IYDSEVILRF FDFEFGRSQL FGAGVHDWRN ESHFSLIKGM LDSAVALRQE QLREEGKRSL
FWTARHEQAL FRGLKQLERS GVISRPRLVI QQISLACLLE YLDFRHPDIS WRKLAPAISS
WLSDFETEPA MQSTRPS
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