Gene Ssed_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0938 
Symbol 
ID5610499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1121108 
End bp1121284 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content38% 
IMG OID640931786 
Producthypothetical protein 
Protein accessionYP_001472677 
Protein GI157374077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATT CATCAAAATC TCAATATCCA CCACTGCCTC TCATCCAAAC TTGGATATGG 
ATGATGACCC AATCAGGTGA TAGTGATATT CAACAAAAAG GTCAAAATAA CCTTATTGCT
TCGTTTGGCA GCCTTGCAAA AGCCAATGAA TATCTGGTTA ATCACAATCA GGATTAA
 
Protein sequence
MLDSSKSQYP PLPLIQTWIW MMTQSGDSDI QQKGQNNLIA SFGSLAKANE YLVNHNQD