| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0926 |
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| Symbol | |
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| ID | 5612118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1107765 |
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| End bp | 1108931 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931774 |
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| Product | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase |
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| Protein accession | YP_001472665 |
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| Protein GI | 157374065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.477161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG AATTTTTACC CCTGTGCCGT CCAGCTATCG ACGAACAGGA TATCAGTGCT
GTGGCCGATG TTTTACGCTC GGGTTGGATC ACTACCGGCC CGAAGAGCGC TGAGCTCGAA
GAGTCGATCT TAAGACACAC CGGCGCCCAG CATGCCGTAT CCTTAAGTAG CGCGACCGCT
GGCATGCATT TAGTTCTACT GGTACTAGGT ATCGGCCCGG GTGATGAAGT CATCACCCCC
TCGATGACTT GGGTATCCAC AGTCAATATG ATCACGCTTT TGGGGGCTAA GCCGGTGTTT
GTCGACGTCG ATGCCGATAA CCTGATGACA GATGTGGCCC TGATTGAACC TCTGATCACC
GAACGCACCA AGCTAATTAT TCCGGTACAT TATGCCGGTG CATCTCTTGA TCTCGATGCC
ATCTATGACT TAGGTGAGCG CTATAAGATC CCCGTTATCG AAGATGCTGC CCATGCCTTA
GGTTGTGAGT ACAAGGGGCA CCCGATTGGC AAGACAGGAA CCTGCCTCTT TTCCTTGCAC
GCCATCAAAA ATGTGACCAC AGCAGAGGGC GGTATCTTTA CCACCCAAGA CGCCGAACTC
GCGGCGCGTA TTCGTCGTCT TAAGTTTCAT GGTCTGGGTG TCGATGCCTT TGACCGAGAG
ACTCAGGGGC GAGCCCCGCA GGCTGAGGTC ATCGAACCCG GCTATAAGTA CAACATGCCT
GATATCTGCG CCGTACTTGC ATTAGGACAG ATGAAGCGCA TCGGTGAGAT CACCCAAAAA
CGCACCGAAC TCGCTCTGCA CTACCGCGAT TTGTTAACAG CAGTCGGTGG CATAACGCCT
TTAAGCATCC CCTCCTATGA GCACCGTCAC TGCTGGCACT TGATGATAAT TCGAGTCGAT
CCTCTTATCT GCGGACTCAA TCGAGACCAG CTCATTGCAC GCTTGAAAGA GTGCAACATC
GGTGCGGGGA TCCACTTTAA AGCCTGCCAC ACTCAGAAAT ATTATCGAGA AAATTACACT
GCAAAGTTTG GTGAAATAAC TAAATCATTA ACGAACACCG AACATAATAG TGAGCAGATC
TGCTCTTTAC CTCTGTTCCC AGACATGAAC TTTAGCGATG TTGAACGCGT CGTCGCTGCG
ATCTCTGAAA TTGTTGGAAA TAAATAA
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| Protein sequence | MSNEFLPLCR PAIDEQDISA VADVLRSGWI TTGPKSAELE ESILRHTGAQ HAVSLSSATA
GMHLVLLVLG IGPGDEVITP SMTWVSTVNM ITLLGAKPVF VDVDADNLMT DVALIEPLIT
ERTKLIIPVH YAGASLDLDA IYDLGERYKI PVIEDAAHAL GCEYKGHPIG KTGTCLFSLH
AIKNVTTAEG GIFTTQDAEL AARIRRLKFH GLGVDAFDRE TQGRAPQAEV IEPGYKYNMP
DICAVLALGQ MKRIGEITQK RTELALHYRD LLTAVGGITP LSIPSYEHRH CWHLMIIRVD
PLICGLNRDQ LIARLKECNI GAGIHFKACH TQKYYRENYT AKFGEITKSL TNTEHNSEQI
CSLPLFPDMN FSDVERVVAA ISEIVGNK
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