| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0918 |
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| Symbol | |
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| ID | 5614242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1098917 |
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| End bp | 1099696 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931766 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001472657 |
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| Protein GI | 157374057 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000099998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.047994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA TTTATAAAAT CTCGCTGGTT GCGTTGGCCG TTATTGGTCT GTCTGCTTGT
AACCAAGAAC AAAAAACAGC TGAAACTGCT GCCAATGTCG AATTGAAAAC AGAAGCACAG
AAAGAAGCCT ACAGCGTCGG CGCCTCTATC GGTAAGTATA TGTCAGGTCA TATCAAAGAG
CAGGAAGAGT TAGGTATGGC TGTCGATCGT AGCCTTATCA TTACTGGTTT TACTAATGGC
CTAAACGATG AGTTAAAGCT CAACGAAGAG GAGATGCAGA CCGTTCTTCA AGGCCTTGAT
GAGAAGCTTA ATGAAAAGCG TCAGGCACAA GCTGCTGCAC TTGCAGAGAA AGCCTCATCT
GAAAGCAAGG CATTTTTAGA TGCGAATAAG GTTAAAGAGG GAGTGGTTAC TACTGAATCA
GGCCTTCAGT ATGAAGTTAT GACACCGGGT ACTGGCGACA AGCCTTCGGC TGAAGATACC
GTTGAAGTTC ATTATGTTGG TACACTTACT GACGGCACCG AGTTTGATAG CTCAGTTGCA
CGAGGCGAGC CTGCTAAGTT CCCGCTTAAC CGTGTGATCC CTGGTTGGAC CGAAGGCGTT
CAATTGATGC CTGTTGGCGC TAAGTACAAA TTCGTTATCC CTGCAGAGCT TGCTTATGGT
GACCGTGATA CCGGTACGAT TCCAGCAAAT TCAACATTAG TATTTGAAGT CGAGCTATTG
TCTATCGAAA AAGCGACTGC CCCGACTGCA GAAGCAGCAA CAGACGGTCA CGCTCACTAA
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| Protein sequence | MKSIYKISLV ALAVIGLSAC NQEQKTAETA ANVELKTEAQ KEAYSVGASI GKYMSGHIKE
QEELGMAVDR SLIITGFTNG LNDELKLNEE EMQTVLQGLD EKLNEKRQAQ AAALAEKASS
ESKAFLDANK VKEGVVTTES GLQYEVMTPG TGDKPSAEDT VEVHYVGTLT DGTEFDSSVA
RGEPAKFPLN RVIPGWTEGV QLMPVGAKYK FVIPAELAYG DRDTGTIPAN STLVFEVELL
SIEKATAPTA EAATDGHAH
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