| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0916 |
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| Symbol | |
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| ID | 5614240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1097514 |
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| End bp | 1097726 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931764 |
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| Product | SlyX family protein |
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| Protein accession | YP_001472655 |
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| Protein GI | 157374055 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2900] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000886286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0392452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAAT TAGAAAGAAG AATCGAAGAT CTTGAGATGA AACTAGCATT TCAAGAAGGC
ACCATAGAAG AGCTGGACCA ACAGGTAATC AAGCTCAATG ACCTGATGGC AGCTCAGCAG
CAGCAACTGC GTATACTCAT CACTAAGTTG CAGTCGGTGG AACCCAGCAA CATGGCAAAC
CAGTCAGAAG AGTCGCCACC ACCGCACTAT TAA
|
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| Protein sequence | MDQLERRIED LEMKLAFQEG TIEELDQQVI KLNDLMAAQQ QQLRILITKL QSVEPSNMAN
QSEESPPPHY
|
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| |