| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0913 |
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| Symbol | |
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| ID | 5613998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1092423 |
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| End bp | 1095062 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931761 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001472652 |
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| Protein GI | 157374052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00120566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAATCTGC TGCGTGTCTG TTTACTCTCA ATGCTCTCTC TCTCTATCAT CTCCTGCAGC
AGCACAGAAA AATCACAATC AGAGCACCGC GAAACAAACT CCTATATCAG CCAGCAGCAG
GCTCAATCCC GCTCAGAAAG AGTCTCCGAG GTGAGTTATC AGCTGGACTT CACCTTAACC
GGTCAGAGTG AATTTAGCGG GGTAACACGC GTCAATTTCA CCCTCTCTGA TACAGACTCC
CCCCTGACCT TAGATCTCAA CCAGGCCACA ATTAAAAGCT TTATCATCAA CGGTCATAAG
ATCTATCCGA GGTACAATGG CAGTTACTTC ACCTTGAACC CCGGCCTGCT AATCTCAGGC
AGCAACACCA TAGAGGTCGC TTACACACGA AAGCACAGCA CTAATGGCGA AGGTTTGCAC
CGCTTCGTCG ATCCTATCGA TGAAAAGGTC TATCTCTACT CCCATTTCGA GCCCGCTGCC
GCGCAGCAGA TGTTTGCCCT GTTCGATCAA CCCGACCTGA AAGCGAGCTA TCAGTTAACC
GTCACCGCAC CCAAAGATTG GGTCGTTATC AGCGCCATGA AAGAACTGAG CATAACCGCG
ACGGGAGAGA GTAATCGCTG GCATTTTCCG GCCAGTCCGA AATTGAGTCC CTATAATTTT
TCACTCCATG CCGGTCCCTA CCATGTATGG CAAGATAACA GTGGTAAGTA CCCACTACGC
CTCTTTTCCC GTCAATCTGT CGCAGAGCAG GTCACTCCCG AAGATTGGTT TACCTACACC
CAACAGGGGC TAACCTTCTT CGACGATTAT TTCGGGATCC CCTACCCCTT TAACAAGTAC
GATCAGCTGC TGGTCCCAGA CTTTCTCTAC GGCGCCATGG AAAATGCCGC CGCCGTGACC
TTCAGTGAAA ATTATTTCCT GCATAAGAAT AAGATGACCT TAGCTCAAAA ACAGAGTTTA
GCCGGGGTTA TCATGCATGA GATGGCTCAT CAGTGGTTTG GTAATCTGGT CACCATGAAG
TGGTGGAATG GTTTATGGCT CAACGAGAGC TTTGCCTCCT TCATGGCGAC ACTTGCCACC
GCAGAAGCCA CCGAATTCCC CCAGGCTTGG CGCAGCTTCT ACGCCAAGGG GAAACAGAAA
GCTTACGAAC AGGATAGCCG GGTCACGACG CACCCTATCG AAGTGCCGGT ACCCACCTCT
CAGAGTGCCT TCGATAATAT CGATGCCATC ACCTATCAAA AAGGGTCTTC GGTACTCGTA
CAGCTCAACC ACCTTTTAGG TGCTAAGGTG TTTAAACAGG GAGTACAAGA CTACCTGAAA
CAGTACAGCT ATCAGAATGC GGAGTTGCAA GATTTTATTG CCAGCCTTGG GAACACTGCC
AAACGCGATC TCAGCACCTG GAGCGATGAA TGGCTCGACC ACGGCGGCGT AAACACAATA
AAGGCCGAAT ATAGCTGTGA AGCGAACCGC ATCACCTCAT TCGCCCTACT GCAGTTTCCC
GCAAGCAATG AACTACCAAA ATTAAGAGAA CAGAGAGTAA AGCTTGGCCT CTTTACCAAG
GGGCGCCGGG AGCTTCATAG AAATGTCACG GTTCCCGTCA CTTACAAAGG GGCAAGAACC
GAGGTCAAAC GTCTTATTGG ATCCCGATGT CCTGATCTTG TCTATCCCAA TTATCAGGAC
TGGGGCTATG TGAAAGTCAT CCTCGATGAC AAGTCATTCG AAACCGCCAA ACAAGATCTC
AACATGATGA AAGATCCTAT GCTGAGGTCT ATGCTATGGC AAAGCCTGTG GGATAGTGTG
ACCAGCGGTG TATTGCCACT GGATAAGTAT CTGGGCACGG TATTTATTAA TCTCCCTCAT
GAGCAAGATT ACATCATCTT AGGTCAGGTG TTAGCCAATC TCTATCAGAG TAAGTCTTAT
CTTGAGCAGA TGCTTCCGAT CCATCGAAGC TACACAGGTA AAGTACTTAA AGGCCTGGCA
CAGATGAGCC TCAGAAATAC CATGACAAAC GCTGGCAACA GTGACTTTCA GCGCCGTTGG
TTCGATGCGT ATGTCCAGTT CTCACGTAGT CCACGCGCCT TAGCTCATCT TGAACAGCTG
TTGCAAGGCC GAGCGTCGAT CCGGGGGTTA ACGCTGGATC AGGACACACG ATGGAAAATA
ATTACTCAGC TCAATCGTTA TGATCATAAC GGCAGCCGAA AACTGCTTGA GAAAGAACAA
AAATCCGATT TGAGTGATTC CGGGGAGAAG GCTGCCATTG GGGCGCTGGT ATCGCGGCCA
GAAGCCAGCA TTAAGCGCCG TTGGTTATAC CGTATCGAAC ATGGTCAAGC ATTGCCTTTC
TCTAAGCTCA GCACCGCCAT GTCTCATCTT TACCCTAAAG AGCAGAAAAT GTTGAGCGCC
GCCACTTCAG AGCAGAGACT TGCCGACTTA GCAGAGATAG ACGGGCGCAA AGACCCTGTC
TTTATGCGAA GCTATGCCAC AAATCTTATC CCGATCCAAT GTGACCATGC GGGCATCGCC
CTGCTACAGA AAGCTATCGA TAAACACACG GAGCTGTCGA TGGGGACCAG GCGGGCACTG
TTAGAGGCGC ACCAAAATGA GGTACGCTGC GTAATCATCA AGGAAAAAAT ATTGCACTAG
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| Protein sequence | MNLLRVCLLS MLSLSIISCS STEKSQSEHR ETNSYISQQQ AQSRSERVSE VSYQLDFTLT
GQSEFSGVTR VNFTLSDTDS PLTLDLNQAT IKSFIINGHK IYPRYNGSYF TLNPGLLISG
SNTIEVAYTR KHSTNGEGLH RFVDPIDEKV YLYSHFEPAA AQQMFALFDQ PDLKASYQLT
VTAPKDWVVI SAMKELSITA TGESNRWHFP ASPKLSPYNF SLHAGPYHVW QDNSGKYPLR
LFSRQSVAEQ VTPEDWFTYT QQGLTFFDDY FGIPYPFNKY DQLLVPDFLY GAMENAAAVT
FSENYFLHKN KMTLAQKQSL AGVIMHEMAH QWFGNLVTMK WWNGLWLNES FASFMATLAT
AEATEFPQAW RSFYAKGKQK AYEQDSRVTT HPIEVPVPTS QSAFDNIDAI TYQKGSSVLV
QLNHLLGAKV FKQGVQDYLK QYSYQNAELQ DFIASLGNTA KRDLSTWSDE WLDHGGVNTI
KAEYSCEANR ITSFALLQFP ASNELPKLRE QRVKLGLFTK GRRELHRNVT VPVTYKGART
EVKRLIGSRC PDLVYPNYQD WGYVKVILDD KSFETAKQDL NMMKDPMLRS MLWQSLWDSV
TSGVLPLDKY LGTVFINLPH EQDYIILGQV LANLYQSKSY LEQMLPIHRS YTGKVLKGLA
QMSLRNTMTN AGNSDFQRRW FDAYVQFSRS PRALAHLEQL LQGRASIRGL TLDQDTRWKI
ITQLNRYDHN GSRKLLEKEQ KSDLSDSGEK AAIGALVSRP EASIKRRWLY RIEHGQALPF
SKLSTAMSHL YPKEQKMLSA ATSEQRLADL AEIDGRKDPV FMRSYATNLI PIQCDHAGIA
LLQKAIDKHT ELSMGTRRAL LEAHQNEVRC VIIKEKILH
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