| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0904 |
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| Symbol | |
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| ID | 5613062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1079782 |
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| End bp | 1080852 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931752 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472643 |
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| Protein GI | 157374043 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.844767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000607436 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGAA TAACTAAAAC AGCGTTAGTG GTAGCTACAT TTTTCTCAGC ACCTTCTTTC
GCCGGCTACG AAGTCCAAAT TGATGACACC TCGAAGTTAA CTTTCGGTGG CTACTTCAAA
GCCGACTTGC GTAATGTCAG CGGCGACCAA GCTTACCGAG ACTTCTGGAT TGGTTCCAGT
ACAGGCGTGC CAGATACCAA TAAAACCAGC ATTCAGGCCA GAGAGTCGCG CTTCAATGTT
AAGTACTCCA ATGGCGAGTT AGCGGGATTT CTCGAGTATG ATTTCTATGG TAGTGACGGT
AACGCATTAG TTTCTAACTC ATACGAGCCG CGTATGCGTC ATGCTTTTAT CTCTTACAAG
AACTGGAAAG TCGGCCAGAC TTGGTCAACC TTTATGCCAC TGGCCTCTAT CGCCGAGGCG
CTGGACTTTG GTGGAGCGCA CGTAGGTCAG GTGTTCATTC GTCAAGGCCA GATACGTTAC
ACCAATGGCG GGCTGGAACT GGCGCTGGAA AACCCGGCGA ACGCTACCGA TGACAATCAG
AGTATCCCCG ATGTAGTGGC TCGTTACACT TTCAAAGGCG ATTTTGGTCA GGTGGCCGTT
GCCGCGCTGG CTCGCACCTT TGATGACAAC GGTGTGGCTG GTCATGCCGA TGGCACTCAG
TTGGCTTACA GCATAAGCGG TAAAATCAAT ACCTTTGGTA AAGATGATTT CCGTTTCGCC
TATAACGCGG GCGCTGCGGG TCGTTATATT TCACCAGGTC ACAACGCCGG CGACAAGGTT
AATGCCGATG GCAGTGGTGA TCTGCTGACA ACGCAAGCTT ACACCGTTGC CTATCGCCAT
TTTTGGACTG ACGATTTGCG CTCTACCGTT TACTACGGCC ACTCTGAAGT AGAAGATTTC
AATGGTGTGA GTGCTGACTC TGATCGTAAC CACTACGGCA TCAACCTGAT CCAGCAGCTT
AGCAAGCAGT TAAGCGTGGG CGTTGAATTC GGTAACTATG ATGCTGATAT ATCAGCCACT
GAAACTGCGG ATTCTGATTA CATCCAGCTT TCGGCCAAGT ACGTACTTTA A
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| Protein sequence | MNRITKTALV VATFFSAPSF AGYEVQIDDT SKLTFGGYFK ADLRNVSGDQ AYRDFWIGSS
TGVPDTNKTS IQARESRFNV KYSNGELAGF LEYDFYGSDG NALVSNSYEP RMRHAFISYK
NWKVGQTWST FMPLASIAEA LDFGGAHVGQ VFIRQGQIRY TNGGLELALE NPANATDDNQ
SIPDVVARYT FKGDFGQVAV AALARTFDDN GVAGHADGTQ LAYSISGKIN TFGKDDFRFA
YNAGAAGRYI SPGHNAGDKV NADGSGDLLT TQAYTVAYRH FWTDDLRSTV YYGHSEVEDF
NGVSADSDRN HYGINLIQQL SKQLSVGVEF GNYDADISAT ETADSDYIQL SAKYVL
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