| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0887 |
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| Symbol | |
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| ID | 5612779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1056404 |
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| End bp | 1057078 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931735 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001472626 |
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| Protein GI | 157374026 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCT CCAGCTCAAT AGCTTCAACA ACGGCCCCCA CAAGCGAGGC TGAGAATAGC
CCGACTTCCA ATGAGCTAAG CTCAACACTG GTTTATGATA TTCGAAACAG CCGTTACCTC
AATATCACGG GGCGCTGCAC CCTGCGCTGC CAATTTTGTC CAAAACATAA TGGCAGCAAG
CAGGTTCATG AATATCAATT AGATCTGAAC CATCAGCCAA AAGCGGAAGA GATCATCCCA
TTGCTGGGCG ATGTTGAGCG TTTCGATGAA TATGTATTTT GCGGTTATGG CGAGCCAACC
CTCAATTTAG ACACCCTGCT CACCATAGCC AAAGAGATCA AAAACAGAGG AGGTTATGTC
AGGGTCAATA CAGATGGTTT AGGTAACCTT TTTCATAGAC GTAACATTTT ACCGGAGCTC
GCGATTTGTG TAGATGCCCT CTCCATCTCA CTTAATGCCG ATACCGAACA GGCCTATATG
GAGCACTGCC GACCTAAACT TAAGCACGCC TATCAAAGTG TCTGTGAGTT TATTCGTCTT
GCCCCCGATT ATATTAAGAG TGTTCAAGTC TCTGCCATCG ACGGGCTCGA AGGTGTCGAT
ATAGAAGCGT GTAGAAAATT TGTCGAGACG AGCGGAGCGG AATTTAAACA CAGAATGCTC
GGCGTCGTTG GATAG
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| Protein sequence | MTLSSSIAST TAPTSEAENS PTSNELSSTL VYDIRNSRYL NITGRCTLRC QFCPKHNGSK
QVHEYQLDLN HQPKAEEIIP LLGDVERFDE YVFCGYGEPT LNLDTLLTIA KEIKNRGGYV
RVNTDGLGNL FHRRNILPEL AICVDALSIS LNADTEQAYM EHCRPKLKHA YQSVCEFIRL
APDYIKSVQV SAIDGLEGVD IEACRKFVET SGAEFKHRML GVVG
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