| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0885 |
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| Symbol | |
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| ID | 5612777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1052605 |
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| End bp | 1053990 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931733 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472624 |
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| Protein GI | 157374024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAA TTCGAGTCAA ACAGGAAGAA TCTCTCTCTA TTAAGTTTAT CCACCAGATG
AAGGTGGGCG CTAACCGACG TCTGGATCTC TATTTTTTTC TCCCTAAAGA GATGGGTATT
GGCCCACATA GCCTCAATGA GGAGGAGTAT TACCACTCAG CCATTACCGG TCGTCGTTCA
TATTACTCCT CCGCCTTACA CCTTCCCTTG GTGCAGAGTC GTTTCGCGAG TCAGAAGAAG
CGTACGGTTG AAGAGTTTCG TCTCTATCTG AACCTGTTTG CTTACCAATT TGCGGTCGCC
ATCGAAACAG ACAGCAAGGA GTTGGGGCAG ATAGAGGATG CTGAGGAGTT TTATGGAGCA
CTTAATGCCC TTTATGAGCT GGTTATTCAA CTGCTGAAGA AGTTCCGTCG TAATGAGCCC
AGCGATCCTA AGTGGAAATC GTATTTTGAA AATGCAGATA ACTACCTCTC CTGGTTCTGT
GAACAGCGAT TATTGAAGCT GTTATCGAGA GCGCCAAGAA GCAGCGAATT CAGCGAAATC
GTCGAGAATG TCATCGGCTT GTGTCGCTCT GAACATGAGC ATAGAAAGTC GAAACGATAT
AACTCACTCC ACACAGTTGA AGATCCGAAT CGTATCTCTA ATAAGATGCT ATTACTGAGG
CGGTTAATTC AACAGGGCGT AGTATTAAAA GATGAATTTA AGGTATTAGG TGTTGGCCTG
AAGAAGATGA CCACAGGCTT TGCCACGGCT ATGGTGATGT TGGTCGTTTC CGCCTTGATT
ATTAAGGCTC AGGGCGTGTT CAGTGGGCTT ACGATAGCAT TGGTGCTGAC ACTAGCGGTT
ATTTATGGAT TTCGAGAAAT ATTTAAGGAA GATATCCGTA ACGCTCTATG GCGAGTGATT
CAGAAAGGGC GTCCTAAATG GAGTCGCATT CTCAGGGATA CCACTAGTCA GGCTCCGATT
GCGAAACAAC TCGTCTGGAT GGACTTTATG AAATCGGCGG AGTTGCCTGC TAAGGTTTCT
GAGATTTTGA AGAGGCGTCA TAGCCAGAAT AAACTCGATG CTGAAGTGCT GCATTACGGC
ATACACACCA GGGTGACACA GAAAGATTTT TTAGCCGGAT ACACTACGAT TCAGGAACAG
GTGAACTTCA GCCTTGCGCC ATTTGCACGT TATCTTGAGC GTGGTAAAGC CAAAATCTAT
AGAGAGCAAG ATGGCAAAAT CAGTAATGAC TCTGTCGAGC GTAGATATCA GATAAACATG
ATCTTGGCTG TCAGAGATGA TAAGGATGAG GTTCAATATG CTCGCTACAA GATCACCATG
AATCGCTCGA CCATAATAGA TGTGAGCCAA AGTGATCTCC CCGATGGGAT CCCGGAGATG
GATTAA
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| Protein sequence | MAKIRVKQEE SLSIKFIHQM KVGANRRLDL YFFLPKEMGI GPHSLNEEEY YHSAITGRRS
YYSSALHLPL VQSRFASQKK RTVEEFRLYL NLFAYQFAVA IETDSKELGQ IEDAEEFYGA
LNALYELVIQ LLKKFRRNEP SDPKWKSYFE NADNYLSWFC EQRLLKLLSR APRSSEFSEI
VENVIGLCRS EHEHRKSKRY NSLHTVEDPN RISNKMLLLR RLIQQGVVLK DEFKVLGVGL
KKMTTGFATA MVMLVVSALI IKAQGVFSGL TIALVLTLAV IYGFREIFKE DIRNALWRVI
QKGRPKWSRI LRDTTSQAPI AKQLVWMDFM KSAELPAKVS EILKRRHSQN KLDAEVLHYG
IHTRVTQKDF LAGYTTIQEQ VNFSLAPFAR YLERGKAKIY REQDGKISND SVERRYQINM
ILAVRDDKDE VQYARYKITM NRSTIIDVSQ SDLPDGIPEM D
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