| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0840 |
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| Symbol | |
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| ID | 5612991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1000309 |
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| End bp | 1001367 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931688 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001472579 |
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| Protein GI | 157373979 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGAGCG CACCCTTCTA CTCCGGAGGT ATCTTTGACT ACGATGCTAA GAAAGAGCGT
CTGGAAGAAG TTTGTGCGGA ATTAGAGAGT GCTGAAGTAT GGAGCAATCC GGAAAATGCC
CAGGCTTTAG GTAAAGAGCG TTCCTCTTTA GAGGTCATTG TTAAGACTAT CGATGACATG
GACTCGGGTC TGGAAGATGT TCAGGACTTA GTTGAGCTTG CAGTCGAAGA GGATGATGAA
GAGACCTTCG ATGATGCCAG TACAGAACTC GACGGTCTGG AGAAACGACT CGAAGAACTC
GAATTTCGTC GTATGTTTTC CGGTCCTCAT GATGTTGCAG ATTGTTATCT GGATATTCAA
TCCGGCTCGG GTGGCACAGA GGCTCAGGAT TGGGCCAATA TGGTGCTACG TATGTTCCTT
CGTTGGGGCG ATGCCCATGA CTATAAGCCT GAACTGATTG AAGTTACCGA TGGCGATGTG
GCCGGTATTA AAGGTGCAAC CATCAAGTTT ACCGGTGAAT ATGCCTTCGG TTCTTTGAGA
ACGGAAACCG GGGTACACCG CTTAGTGCGA AAGTCACCAT TTGACTCTTC GGGTAAGCGT
CATACCTCTT TCTGTTCAGT ATTTGTCTAT CCGGAAATTG ATGATTCGAT TGAGATCGAT
ATTAACCCGT CAGATCTGAG AATAGATACT TACCGTGCTT CGGGTGCTGG TGGACAGCAC
GTCAACAAAA CAGAATCGGC GATTCGCATT ACTCACGTAC CGACGAATAC CGTGGTTCAA
TGCCAGAATG ACCGTTCGCA GCATAAGAAC CGTGATGCTG CCATGAAACA GCTTAAAGCC
AAGTTGTATG AGTTAGAGAT GCTCAAACAA AATGCCGACA AACAAGCTGC CGAAGATTCT
AAGTCTGATA TCGGTTGGGG CAGCCAGATC CGCTCATACG TACTCGATGA TGCACGTATT
AAAGATCTGC GTACCGGCGT AGAGAGCCGT AATACCCAAA GTGTCCTCGA TGGCGATTTG
GATAAGTTTA TCGAAGCCAG CCTGAAATCT GGCTTATAA
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| Protein sequence | MPSAPFYSGG IFDYDAKKER LEEVCAELES AEVWSNPENA QALGKERSSL EVIVKTIDDM
DSGLEDVQDL VELAVEEDDE ETFDDASTEL DGLEKRLEEL EFRRMFSGPH DVADCYLDIQ
SGSGGTEAQD WANMVLRMFL RWGDAHDYKP ELIEVTDGDV AGIKGATIKF TGEYAFGSLR
TETGVHRLVR KSPFDSSGKR HTSFCSVFVY PEIDDSIEID INPSDLRIDT YRASGAGGQH
VNKTESAIRI THVPTNTVVQ CQNDRSQHKN RDAAMKQLKA KLYELEMLKQ NADKQAAEDS
KSDIGWGSQI RSYVLDDARI KDLRTGVESR NTQSVLDGDL DKFIEASLKS GL
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