| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0827 |
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| Symbol | |
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| ID | 5612380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 982222 |
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| End bp | 982758 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931675 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472566 |
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| Protein GI | 157373966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.518513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA ACCCCCTTAT TTCGCTCACT CTCGCCGCCC TATTAACCAG CCAACTGACA
GGCTGTATGG GGCAGATGGG GCTCAGCGCG ATGCTTACAA AAGGTAATTT GAGCGCAGTA
GATAACCGCT ATGGCAGAGC CGGACTATTC GTCTTGCTTA GCCCAGTCTA TGGTTTAACC
GCAACCGCAG ATCTATTTAT CTTCAACAGC ATCGAATTTT GGACAGGAAC CAACCCCATC
ACCAAACGCT CTCCAGCGGT TGTTGATATG CCGGTAGAAG CGATTTTTAA GGTTAATTCA
CATTTAAATA AAGAACTCAC GACAGCGCCA CTTCCAGAGG TGAAGCTGAC CAATGCCACC
ATGGAAGCAA CCGATGAAGA GACTTTAGTA ATGACTTTGA CCTTCGATGA TGGCAGTCAG
CAACAGATGT CAGGACATAA ACGAGGGGAA CAGGTCGATT TCTATCTCGA TAATGAGTTT
ATCGCCAGAG TCAGTGTCGA TGAGTTGGCC AGCTACTCCA GTCCGGCAAA GGCGTAG
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| Protein sequence | MMKNPLISLT LAALLTSQLT GCMGQMGLSA MLTKGNLSAV DNRYGRAGLF VLLSPVYGLT
ATADLFIFNS IEFWTGTNPI TKRSPAVVDM PVEAIFKVNS HLNKELTTAP LPEVKLTNAT
MEATDEETLV MTLTFDDGSQ QQMSGHKRGE QVDFYLDNEF IARVSVDELA SYSSPAKA
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