| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0817 |
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| Symbol | |
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| ID | 5611937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 970546 |
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| End bp | 971898 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931665 |
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| Product | aspartate kinase III |
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| Protein accession | YP_001472556 |
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| Protein GI | 157373956 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.784951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000472432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCTGA TTGTTGCTAA GTTTGGTGGT ACCTCTGTCG CAGATTATCC TGCGATGAGT
CGCTGTGCCG ATATTATTCT TGCTAACCCC GATACTCGCC TTGTCGTCGT CAGCGCTTCA
AGTGGCGTCA CCAATCTTCT GGTTGAGTTG ACCCAAGAGC AAACCTGTGA TGAGCGTCGG
ATGCAGCTCA TTAAGAAAAT TGCTCATATT CAATATCAAA TACTCGATGC TTTGGGCAGT
CCACAAGAGG TTGCCGCAAG ACTAGATACC GTGCTTAGTC GTATTTCATC GCTTAGCGAA
GAGCTCAGTC GAAATAGAAA CAAAGCGACA ATGGATGAGT TACTCGCCCA AGGTGAGCAG
TGTTCATCGG CTCTATTTGC TGCGGTACTC AGAGAAAAAG GGGAGGCGGC CAGTGCGTTC
GATGTCCGTC AGGTGATGCG AACAGATAGT CACTTCGGCC GGGCAGAACC TCAAATTGAG
CAAGTTGCCC AGCTCGCCGC TAAGCATTTA GCACCACTAC TAAGCTCGCA GCGAATAGTG
ACGCAAGGTT TTATCGGCGG TGATGAAAAT GGGAGTACGA CAACATTGGG TCGGGGTGGC
AGTGATTACT CCGCAGCGTT ATTGGCTGAG GCCTTGAAAG CGACCGCTGT CGAAATCTGG
ACCGATGTGG CGGGGATATA CACGACCGAT CCTCGCCTGG CACCAAAAGC CAGCCCCATC
GCTGAGATAA GCTTTAATGA GGCTGCTGAG ATGGCAACCT TCGGTGCTAA GGTGTTGCAC
CCTGCGACAA TTTTACCGGC CGTAAGGCAA AAGATTCAGG TGTTTGTCGG TTCCAGTCGT
GAACCAGAAA GAGGCGGGAC CTGGATCCGT CATCAAGTTG AAGATGAGCC GGTTTACCGG
GCCGTTGCGG TTCGTCGTGA TCAAACATTA CTGAATCTCC ATAGCCTGCA GATGCTTCAT
GCTCAAGGCT TCCTGGCTGA AACATTTGCC ACTCTGGCAA GACACAAGAT CAGTGTCGAT
TTGATCACGA CCTCTGAAGT GAACGTCTCA TTGACGCTAG ATAAGACGGG TTCTGATTCC
GCGGGTAATG GCCTGTTGAG TGAAGCCCTG CTGCAAGAGT TGTCACAGCA TTGTCGCGTT
AGAGTCGAAG ATGATTTGGC ATTAGTGGCT ATTGTAGGCA ACAAGATCGC TTCTACTCCA
GGTGTGTGTC GCCGGGTATT TGAGGTATTA GAGCCTCATA ATGTGAGAAT GATCTGTCAG
GGGGCCAGCC CTCACAATCT CTGTGTGTTA GTGTCCGAAT CTGAAGCGGC TCAAGTTGTG
AGTGCACTTC ATAAGAACCT GTTCGAGCAA TAG
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| Protein sequence | MSLIVAKFGG TSVADYPAMS RCADIILANP DTRLVVVSAS SGVTNLLVEL TQEQTCDERR
MQLIKKIAHI QYQILDALGS PQEVAARLDT VLSRISSLSE ELSRNRNKAT MDELLAQGEQ
CSSALFAAVL REKGEAASAF DVRQVMRTDS HFGRAEPQIE QVAQLAAKHL APLLSSQRIV
TQGFIGGDEN GSTTTLGRGG SDYSAALLAE ALKATAVEIW TDVAGIYTTD PRLAPKASPI
AEISFNEAAE MATFGAKVLH PATILPAVRQ KIQVFVGSSR EPERGGTWIR HQVEDEPVYR
AVAVRRDQTL LNLHSLQMLH AQGFLAETFA TLARHKISVD LITTSEVNVS LTLDKTGSDS
AGNGLLSEAL LQELSQHCRV RVEDDLALVA IVGNKIASTP GVCRRVFEVL EPHNVRMICQ
GASPHNLCVL VSESEAAQVV SALHKNLFEQ
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