| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0803 |
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| Symbol | |
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| ID | 5611530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 952142 |
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| End bp | 952843 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931651 |
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| Product | cytochrome c1 |
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| Protein accession | YP_001472542 |
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| Protein GI | 157373942 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000755074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00778647 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAT TACTTATTGC ATTAGTTACC TTAGTTCCAT CTCTAGCATT TGCTGCCGGT
GGTTCACACG TACACTTAGA GAGTGCTAAC GTCGATCTAA ACGACAAAGA GTCTTTGCAG
CGTGGTGTTG ATCTGTTTCA ACACAACTGT GCTGGTTGTC ATAGTACTCA GTATCAGCGT
TATAGCCGTG TTGCCGACGA TTTAGACATC TCTATCGATG ATATGCGTAG CAAGTATATG
TTCGATGAAA ATGCTAAGCC TGGCGATTTG ATGCAAAACG CGATACCGGA AGCCGATGCG
GCTAAATGGT TTGGCGCAGC GCCACCGGAT CTGACTTTAG TTGCACGAGT TCGTGGAGAA
GACTGGGTTT ACACTTACTT GAAGGGCTTT TATAAAGATG AGAGTCGTCC TTTTGGTGTC
AACAATACAG TCTTTCCTGC AGTGGGTATG CCTCATGTTC TCGAACATCT GCAAGGACTT
CCTGTAAAAC AGGAAGATGG CACGACAGTC GCCACTGGCG GTAAACTATC TGCCGAAGAG
TATGATCAAG TTGTACGTGA TATCACCGGA TTCCTGGTTT ACTCAGGGGA CCCAGTAAAA
CTTGAGCGTG AAAGCTTAGG TTGGTGGGTG ATGGGCTTTC TGTTTATCTT CTTCGTCATC
GCTTATCTGT TGAAGAAAGA GTACTGGAAA GATGTACACT AA
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| Protein sequence | MKKLLIALVT LVPSLAFAAG GSHVHLESAN VDLNDKESLQ RGVDLFQHNC AGCHSTQYQR
YSRVADDLDI SIDDMRSKYM FDENAKPGDL MQNAIPEADA AKWFGAAPPD LTLVARVRGE
DWVYTYLKGF YKDESRPFGV NNTVFPAVGM PHVLEHLQGL PVKQEDGTTV ATGGKLSAEE
YDQVVRDITG FLVYSGDPVK LERESLGWWV MGFLFIFFVI AYLLKKEYWK DVH
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