| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0798 |
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| Symbol | |
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| ID | 5611058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 946641 |
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| End bp | 947939 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931646 |
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| Product | GTP-binding protein, HSR1-related |
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| Protein accession | YP_001472537 |
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| Protein GI | 157373937 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00968624 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTTGAGC GTTATGAGGC GGGTGAGAAT GCGGTCCTTG TCCATATCGA CTTTTCCGAT
GAAGATAGTA GGGAGGATCT AGTCGAACTC CAATTATTGG TAGAGTCGGC TGGGGCCCAG
TCAATCGGAG TGATAACAGG AAGTCGCCGA TCACCGGACC GAAAATTCTT TGTAGGTTCG
GGAAAGGCCG AAGAGTTAGC TGCATTGGTT GCAGCGACAG AAGCAAATGT GGTGATTTTT
AATCATGCAC TGAGTCCCGC TCAGGAGCGA AATCTTGAGC AGTTATGCCA ATGTCGTGTG
CTGGACCGCA CTACTCTCAT TTTAGATATT TTTGCCCAAA GGGCACGCAC GTACGAAGGT
AAGTTGCAGG TGGAGCTAGC GCAGTTACGC CATATGTCGA CACGCCTGAT ACGCGGCTGG
ACCCATCTTG AGAGGCAAAA AGGCGGTATT GGTCTTCGGG GACCTGGGGA AACTCAGCTC
GAAACTGATA GACGTTTGTT ACGTGGACGG ATCAGAACGA TTAACCGTCG TTTGGATAAA
GTGGATAAGC AGCGAGAGCA GAGCCGACGC TCGAGACGCC GTAGTGATTT AGCTACTGTA
TCTTTGGTTG GATATACCAA TGCCGGCAAA TCTACACTGT TTAATTCGCT CACGGCATCA
AATGTTTATG CCGCCGATCA GCTTTTTGCC ACACTTGATC CTACCTTGAG AAAGTTAGAA
TTAAGAGATG GTGGGATTAT ATTAGCTGAT ACCGTTGGTT TTATTCGCCA TCTACCCCAT
GATTTAGTGG CAGCATTTAA GGCTACATTA CAAGAGACAC GAGAAGCGGA TCTTTTACTT
CATATTGTTG ATTGTGCCGA TGAGGATATG GGAGATAACT TTGAGCAAGT TCAAAAAGTG
CTCAAGGAGA TAGGTGCCGA AGAGATTCCA CAACTGGTTG TCTGTAATAA GATTGACCTG
TTAGAGGATG TAAGCCCGAA GATCGATTAT GACTCCGAAG GCATACCGAC ACGAGTCTGG
GTATCTGCCC AGCAGCAAAA AGGCTTGGAA CAACTAAAGG AAGCTATCAA CGCTCTTGTT
GGTAAGACGA ATTTAGAATT AACCTTGCAA ATTCCAGCAA CTGCTGGACA TTATCTTGGT
CAGTTTTACA GACTTGATGT GATACAGCAG AAAGAGTACG ACGATCTGGG GAACTGTATC
TTATCTGTTC GTTTGTTGGA GGCCGATTGG CGACGACTGA TGAAACAGAG CCAAGGGGAG
TTAGAGACCT TTGTTGTCGA GAATACGGCA GTTGAGTAG
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| Protein sequence | MFERYEAGEN AVLVHIDFSD EDSREDLVEL QLLVESAGAQ SIGVITGSRR SPDRKFFVGS
GKAEELAALV AATEANVVIF NHALSPAQER NLEQLCQCRV LDRTTLILDI FAQRARTYEG
KLQVELAQLR HMSTRLIRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IRTINRRLDK
VDKQREQSRR SRRRSDLATV SLVGYTNAGK STLFNSLTAS NVYAADQLFA TLDPTLRKLE
LRDGGIILAD TVGFIRHLPH DLVAAFKATL QETREADLLL HIVDCADEDM GDNFEQVQKV
LKEIGAEEIP QLVVCNKIDL LEDVSPKIDY DSEGIPTRVW VSAQQQKGLE QLKEAINALV
GKTNLELTLQ IPATAGHYLG QFYRLDVIQQ KEYDDLGNCI LSVRLLEADW RRLMKQSQGE
LETFVVENTA VE
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